Causal Explainability of Machine Learning in Heart Failure Prediction from Electronic Health Records

Fuente: arXiv
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Autores principales: Hou, Yina, Rabbani, Shourav B., Hong, Liang, Diawara, Norou, Samad, Manar D.
Formato: Preprint
Publicado: 2025
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author Hou, Yina
Rabbani, Shourav B.
Hong, Liang
Diawara, Norou
Samad, Manar D.
author_facet Hou, Yina
Rabbani, Shourav B.
Hong, Liang
Diawara, Norou
Samad, Manar D.
contents The importance of clinical variables in the prognosis of the disease is explained using statistical correlation or machine learning (ML). However, the predictive importance of these variables may not represent their causal relationships with diseases. This paper uses clinical variables from a heart failure (HF) patient cohort to investigate the causal explainability of important variables obtained in statistical and ML contexts. Due to inherent regression modeling, popular causal discovery methods strictly assume that the cause and effect variables are numerical and continuous. This paper proposes a new computational framework to enable causal structure discovery (CSD) and score the causal strength of mixed-type (categorical, numerical, binary) clinical variables for binary disease outcomes. In HF classification, we investigate the association between the importance rank order of three feature types: correlated features, features important for ML predictions, and causal features. Our results demonstrate that CSD modeling for nonlinear causal relationships is more meaningful than its linear counterparts. Feature importance obtained from nonlinear classifiers (e.g., gradient-boosting trees) strongly correlates with the causal strength of variables without differentiating cause and effect variables. Correlated variables can be causal for HF, but they are rarely identified as effect variables. These results can be used to add the causal explanation of variables important for ML-based prediction modeling.
format Preprint
id arxiv_https___arxiv_org_abs_2506_03068
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Causal Explainability of Machine Learning in Heart Failure Prediction from Electronic Health Records
Hou, Yina
Rabbani, Shourav B.
Hong, Liang
Diawara, Norou
Samad, Manar D.
Machine Learning
Computers and Society
The importance of clinical variables in the prognosis of the disease is explained using statistical correlation or machine learning (ML). However, the predictive importance of these variables may not represent their causal relationships with diseases. This paper uses clinical variables from a heart failure (HF) patient cohort to investigate the causal explainability of important variables obtained in statistical and ML contexts. Due to inherent regression modeling, popular causal discovery methods strictly assume that the cause and effect variables are numerical and continuous. This paper proposes a new computational framework to enable causal structure discovery (CSD) and score the causal strength of mixed-type (categorical, numerical, binary) clinical variables for binary disease outcomes. In HF classification, we investigate the association between the importance rank order of three feature types: correlated features, features important for ML predictions, and causal features. Our results demonstrate that CSD modeling for nonlinear causal relationships is more meaningful than its linear counterparts. Feature importance obtained from nonlinear classifiers (e.g., gradient-boosting trees) strongly correlates with the causal strength of variables without differentiating cause and effect variables. Correlated variables can be causal for HF, but they are rarely identified as effect variables. These results can be used to add the causal explanation of variables important for ML-based prediction modeling.
title Causal Explainability of Machine Learning in Heart Failure Prediction from Electronic Health Records
topic Machine Learning
Computers and Society
url https://arxiv.org/abs/2506.03068