Engineering Supercomputing Platforms for Biomolecular Applications
Fuente:
arXiv
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| Main Authors: | Welch, Robert, Laughton, Charles, Henrich, Oliver, Burnley, Tom, Cole, Daniel, Real, Alan, Harris, Sarah, Gebbie-Rayet, James |
|---|---|
| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | |
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