Bayesian Non-Negative Matrix Factorization with Correlated Mutation Type Probabilities for Mutational Signatures
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arXiv
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| Main Authors: | Lang, Iris, Landy, Jenna, Parmigiani, Giovanni |
|---|---|
| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | |
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