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Main Authors: Shi, Jianlin, Bucher, Brian T.
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2506.16628
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author Shi, Jianlin
Bucher, Brian T.
author_facet Shi, Jianlin
Bucher, Brian T.
contents Despite advances in machine learning (ML) and large language models (LLMs), rule-based natural language processing (NLP) systems remain active in clinical settings due to their interpretability and operational efficiency. However, their manual development and maintenance are labor-intensive, particularly in tasks with large linguistic variability. To overcome these limitations, we proposed a novel approach employing LLMs solely during the rule-based systems development phase. We conducted the initial experiments focusing on the first two steps of developing a rule-based NLP pipeline: find relevant snippets from the clinical note; extract informative keywords from the snippets for the rule-based named entity recognition (NER) component. Our experiments demonstrated exceptional recall in identifying clinically relevant text snippets (Deepseek: 0.98, Qwen: 0.99) and 1.0 in extracting key terms for NER. This study sheds light on a promising new direction for NLP development, enabling semi-automated or automated development of rule-based systems with significantly faster, more cost-effective, and transparent execution compared with deep learning model-based solutions.
format Preprint
id arxiv_https___arxiv_org_abs_2506_16628
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Initial Investigation of LLM-Assisted Development of Rule-Based Clinical NLP System
Shi, Jianlin
Bucher, Brian T.
Computation and Language
Machine Learning
Despite advances in machine learning (ML) and large language models (LLMs), rule-based natural language processing (NLP) systems remain active in clinical settings due to their interpretability and operational efficiency. However, their manual development and maintenance are labor-intensive, particularly in tasks with large linguistic variability. To overcome these limitations, we proposed a novel approach employing LLMs solely during the rule-based systems development phase. We conducted the initial experiments focusing on the first two steps of developing a rule-based NLP pipeline: find relevant snippets from the clinical note; extract informative keywords from the snippets for the rule-based named entity recognition (NER) component. Our experiments demonstrated exceptional recall in identifying clinically relevant text snippets (Deepseek: 0.98, Qwen: 0.99) and 1.0 in extracting key terms for NER. This study sheds light on a promising new direction for NLP development, enabling semi-automated or automated development of rule-based systems with significantly faster, more cost-effective, and transparent execution compared with deep learning model-based solutions.
title Initial Investigation of LLM-Assisted Development of Rule-Based Clinical NLP System
topic Computation and Language
Machine Learning
url https://arxiv.org/abs/2506.16628