Cover Image

Actively induced supercoiling can slow down plasmid solutions by trapping the threading entanglements

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Staňo, Roman, Rusková, Renáta, Račko, Dušan, Smrek, Jan
Format:	Preprint
Published:	2025
Subjects:	Soft Condensed Matter Mesoscale and Nanoscale Physics Statistical Mechanics Biological Physics Biomolecules
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Entropic tug of war: Topological constraints spontaneously rectify the dynamics of a polymer with heterogeneous fluctuations
by: Höfler, Adam H. T. P., et al.
Published: (2024)

Carbonic anhydrase II simulated with a universal neural network potential
by: Duignan, Timothy T.
Published: (2025)

Protein atom traps as seeing by neutron scattering
by: Koniukov, Georgii
Published: (2024)

Compression-induced continuous phase transition in the buckling of a semiflexible filament for two and three dimensions
by: Mondal, Ananya, et al.
Published: (2022)

How Do Proteins Fold?
by: Bustamante, Carlos, et al.
Published: (2025)

Response of Worm-like Chains to Traveling-Wave Active Forces
by: Cecconi, Fabio, et al.
Published: (2024)

Structured Random Binding: a minimal model of protein-protein interactions
by: Zou, Ling-Nan
Published: (2025)

Hairygami: Analysis of DNA Nanostructures' Conformational Change Driven by Functionalizable Overhangs
by: Sample, Matthew, et al.
Published: (2023)

Scaling Laws and Paradoxical Metastable States in Nanofilament Entropic Separation
by: Vilar, Jose M. G., et al.
Published: (2026)

Field-extension statistics of charged semiflexible polymers stretched with uniform electric fields
by: Mondal, Ananya, et al.
Published: (2024)

Modular DNA origami-based electrochemical detection of DNA and proteins
by: Jeon, Byoung-jin, et al.
Published: (2023)

Statistical method for A-RNA and B-DNA
by: Zoli, Marco
Published: (2025)

Diffusion of intrinsically disordered proteins within viscoelastic membraneless droplets
by: Watanabe, Fuga, et al.
Published: (2024)

Determining the optimal structural resolution of proteins through an information-theoretic analysis of their conformational ensemble
by: Mele, Margherita, et al.
Published: (2023)

Competitive ligand binding kinetics to linear polymers
by: Villaluenga, Juan P. G., et al.
Published: (2024)

Insights into elastic properties of coarse-grained DNA models: q-stiffness of cgDNA vs. cgDNA+
by: Laeremans, Wout, et al.
Published: (2024)

Statistical Mechanics of Multiplectoneme Phases in DNA
by: Segers, Midas, et al.
Published: (2024)

Surface Induced Frustration of Inherent Dipolar Order in Nanoconfined Water
by: Mondal, Sayantan, et al.
Published: (2025)

Stochastic nucleosome disassembly mediated by remodelers and histone fragmentation
by: Li, Xiangting, et al.
Published: (2023)

Universal Loop Statistics from Active Extrusion with Kinetic Barriers
by: Chervinskaya, A., et al.
Published: (2026)

Physical Principles of Size and Frequency Scaling of Active Cytoskeletal Spirals
by: Soni, Aman, et al.
Published: (2025)

Periodic potential can enormously boost free particle transport induced by active fluctuations
by: Białas, K., et al.
Published: (2022)

Active learning of the thermodynamics-dynamics tradeoff in protein condensates
by: An, Yaxin, et al.
Published: (2023)

Thermodynamic Geometric Control of Active Matter
by: Wang, Yating, et al.
Published: (2024)

Continuous-time random walk model for the diffusive motion of helicases
by: Rodriguez-Franco, V., et al.
Published: (2025)

Collective adsorption of pheromones at the water-air interface
by: Jami, Ludovic, et al.
Published: (2025)

Ion channels in critical membranes: clustering, cooperativity, and memory effects
by: Suma, Antonio, et al.
Published: (2024)

Free energy, rates, and mechanism of transmembrane dimerization in lipid bilayers from dynamically unbiased molecular dynamics simulations
by: Jackel, Emil, et al.
Published: (2024)

Predicting heteropolymer interactions: demixing and hypermixing of disordered protein sequences
by: Adachi, Kyosuke, et al.
Published: (2024)

Coarse-grained modelling of DNA-RNA hybrids
by: Ratajczyk, Eryk J., et al.
Published: (2023)

Quantifying the liquid-liquid transition in cold water/glycerol mixtures by ih-RIDME
by: Kuzin, Sergei, et al.
Published: (2025)

A detailed field theory for RNA-like molecules with periodic base sequence
by: Dengler, Richard
Published: (2024)

cgNA+min: computation of sequence-dependent dsDNA energy-minimising minicircle configurations
by: Singh, Raushan, et al.
Published: (2024)

Electrodynamic forces driving DNA-protein interactions at large distances
by: Faraji, E., et al.
Published: (2024)

Impact of Co-Excipient Selection on Hydrophobic Polymer Folding: Insights for Optimal Formulation Design
by: Zajac, Jonathan W. P., et al.
Published: (2024)

Investigation on non-ergodicity of protein dynamics
by: Maggi, Luca
Published: (2025)

Quantitative Prediction of Protein-Polyelectrolyte Binding Thermodynamics: Adsorption of Heparin-Analog Polysulfates to the SARS-CoV-2 Spike Protein RBD
by: Neander, Lenard, et al.
Published: (2024)

Unzipping of knotted DNA via nanopore translocation
by: Suma, Antonio, et al.
Published: (2024)

Insights into Protein Unfolding under pH, Temperature, and Shear using Molecular Dynamics Simulations
by: Jia, Yinhao, et al.
Published: (2024)

Iterative Annealing Mechanism for Protein and RNA Chaperones
by: Hyeon, Changbong, et al.
Published: (2025)