CosmoBench: A Multiscale, Multiview, Multitask Cosmology Benchmark for Geometric Deep Learning

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Main Authors: Huang, Ningyuan, Stiskalek, Richard, Lee, Jun-Young, Bayer, Adrian E., Margossian, Charles C., Jespersen, Christian Kragh, Perez, Lucia A., Saul, Lawrence K., Villaescusa-Navarro, Francisco
Format: Preprint
Published: 2025
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author Huang, Ningyuan
Stiskalek, Richard
Lee, Jun-Young
Bayer, Adrian E.
Margossian, Charles C.
Jespersen, Christian Kragh
Perez, Lucia A.
Saul, Lawrence K.
Villaescusa-Navarro, Francisco
author_facet Huang, Ningyuan
Stiskalek, Richard
Lee, Jun-Young
Bayer, Adrian E.
Margossian, Charles C.
Jespersen, Christian Kragh
Perez, Lucia A.
Saul, Lawrence K.
Villaescusa-Navarro, Francisco
contents Cosmological simulations provide a wealth of data in the form of point clouds and directed trees. A crucial goal is to extract insights from this data that shed light on the nature and composition of the Universe. In this paper we introduce CosmoBench, a benchmark dataset curated from state-of-the-art cosmological simulations whose runs required more than 41 million core-hours and generated over two petabytes of data. CosmoBench is the largest dataset of its kind: it contains 34 thousand point clouds from simulations of dark matter halos and galaxies at three different length scales, as well as 25 thousand directed trees that record the formation history of halos on two different time scales. The data in CosmoBench can be used for multiple tasks -- to predict cosmological parameters from point clouds and merger trees, to predict the velocities of individual halos and galaxies from their collective positions, and to reconstruct merger trees on finer time scales from those on coarser time scales. We provide several baselines on these tasks, some based on established approaches from cosmological modeling and others rooted in machine learning. For the latter, we study different approaches -- from simple linear models that are minimally constrained by symmetries to much larger and more computationally-demanding models in deep learning, such as graph neural networks. We find that least-squares fits with a handful of invariant features sometimes outperform deep architectures with many more parameters and far longer training time. Still there remains tremendous potential to improve these baselines by combining machine learning and cosmology to fully exploit the data. CosmoBench sets the stage for bridging cosmology and geometric deep learning at scale. We invite the community to push the frontier of scientific discovery by engaging with this dataset, available at https://cosmobench.streamlit.app
format Preprint
id arxiv_https___arxiv_org_abs_2507_03707
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle CosmoBench: A Multiscale, Multiview, Multitask Cosmology Benchmark for Geometric Deep Learning
Huang, Ningyuan
Stiskalek, Richard
Lee, Jun-Young
Bayer, Adrian E.
Margossian, Charles C.
Jespersen, Christian Kragh
Perez, Lucia A.
Saul, Lawrence K.
Villaescusa-Navarro, Francisco
Machine Learning
Cosmology and Nongalactic Astrophysics
Instrumentation and Methods for Astrophysics
Cosmological simulations provide a wealth of data in the form of point clouds and directed trees. A crucial goal is to extract insights from this data that shed light on the nature and composition of the Universe. In this paper we introduce CosmoBench, a benchmark dataset curated from state-of-the-art cosmological simulations whose runs required more than 41 million core-hours and generated over two petabytes of data. CosmoBench is the largest dataset of its kind: it contains 34 thousand point clouds from simulations of dark matter halos and galaxies at three different length scales, as well as 25 thousand directed trees that record the formation history of halos on two different time scales. The data in CosmoBench can be used for multiple tasks -- to predict cosmological parameters from point clouds and merger trees, to predict the velocities of individual halos and galaxies from their collective positions, and to reconstruct merger trees on finer time scales from those on coarser time scales. We provide several baselines on these tasks, some based on established approaches from cosmological modeling and others rooted in machine learning. For the latter, we study different approaches -- from simple linear models that are minimally constrained by symmetries to much larger and more computationally-demanding models in deep learning, such as graph neural networks. We find that least-squares fits with a handful of invariant features sometimes outperform deep architectures with many more parameters and far longer training time. Still there remains tremendous potential to improve these baselines by combining machine learning and cosmology to fully exploit the data. CosmoBench sets the stage for bridging cosmology and geometric deep learning at scale. We invite the community to push the frontier of scientific discovery by engaging with this dataset, available at https://cosmobench.streamlit.app
title CosmoBench: A Multiscale, Multiview, Multitask Cosmology Benchmark for Geometric Deep Learning
topic Machine Learning
Cosmology and Nongalactic Astrophysics
Instrumentation and Methods for Astrophysics
url https://arxiv.org/abs/2507.03707