Imagen de Portada

Predicting and generating antibiotics against future pathogens with ApexOracle

Fuente: arXiv

Guardado en:

Detalles Bibliográficos
Autores principales:	Leng, Tianang, Wan, Fangping, Torres, Marcelo Der Torossian, de la Fuente-Nunez, Cesar
Formato:	Preprint
Publicado:	2025
Materias:	Machine Learning Quantitative Methods
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Hybrid Machine Learning techniques in the management of harmful algal blooms impact
por: Molares-Ulloa, Andres, et al.
Publicado: (2024)

Biologically-Grounded Multi-Encoder Architectures as Developability Oracles for Antibody Design
por: Crouzet, Simon J.
Publicado: (2026)

Lightweight MSA Design Advances Protein Folding From Evolutionary Embeddings
por: Cao, Hanqun, et al.
Publicado: (2025)

Accelerating MHC-II Epitope Discovery via Multi-Scale Prediction in Antigen Presentation
por: Wan, Yue, et al.
Publicado: (2025)

AbAffinity: A Large Language Model for Predicting Antibody Binding Affinity against SARS-CoV-2
por: Ashraf, Faisal Bin, et al.
Publicado: (2026)

Direct Evidence of Apex-Hypha Interactions During Vegetative Growth of Fungal Thallus via Comprehensive Network and Trajectory Extraction
por: Chassereau, Thibault, et al.
Publicado: (2025)

Calibeating Prediction-Powered Inference
por: van der Laan, Lars, et al.
Publicado: (2026)

Multi-Modality Representation Learning for Antibody-Antigen Interactions Prediction
por: Guo, Peijin, et al.
Publicado: (2025)

Interpretable Causal Representation Learning for Biological Data in the Pathway Space
por: de la Fuente, Jesus, et al.
Publicado: (2025)

CoVAE: correlated multimodal generative modeling
por: Caretti, Federico, et al.
Publicado: (2026)

Self-Improvement Imitation with Biologically Guided Search for Protein Design Under Oracle Budgets
por: Khanna, Ashima, et al.
Publicado: (2026)

Do we need equivariant models for molecule generation?
por: Nowara, Ewa M., et al.
Publicado: (2025)

3D molecule generation by denoising voxel grids
por: Pinheiro, Pedro O., et al.
Publicado: (2023)

Revealing the temporal dynamics of antibiotic anomalies in the infant gut microbiome with neural jump ODEs
por: Adamov, Anja, et al.
Publicado: (2025)

PoET: A generative model of protein families as sequences-of-sequences
por: Truong Jr, Timothy F., et al.
Publicado: (2023)

Limitations of Sequence-Based Protein Representations for Parkinson's Disease Classification: A Leakage-Free Benchmark
por: Núñez-Prado, César Jesús, et al.
Publicado: (2026)

Attribution assignment for deep-generative sequence models enables interpretability analysis using positive-only data
por: Frank, Robert, et al.
Publicado: (2025)

Multi-scale Graph Autoregressive Modeling: Molecular Property Prediction via Next Token Prediction
por: Jiang, Zhuoyang, et al.
Publicado: (2026)

Virtual Cells: Predict, Explain, Discover
por: Noutahi, Emmanuel, et al.
Publicado: (2025)

Conformal Prediction in Dynamic Biological Systems
por: Portela, Alberto, et al.
Publicado: (2024)

Predicting Activity Cliffs for Autonomous Medicinal Chemistry
por: Cuccarese, Michael
Publicado: (2026)

Graph-Theoretic Models for the Prediction of Molecular Measurements
por: Niane, Anna, et al.
Publicado: (2026)

Knowledge from Large-Scale Protein Contact Prediction Models Can Be Transferred to the Data-Scarce RNA Contact Prediction Task
por: Jian, Yiren, et al.
Publicado: (2023)

Optimizing Gene-Based Testing for Antibiotic Resistance Prediction
por: Hagerman, David, et al.
Publicado: (2025)

Enhancing Breast Cancer Prediction with LLM-Inferred Confounders
por: Roy, Debmita
Publicado: (2025)

Dual-Modality Representation Learning for Molecular Property Prediction
por: Zhao, Anyin, et al.
Publicado: (2025)

Improving Antibody Humanness Prediction using Patent Data
por: Ucar, Talip, et al.
Publicado: (2024)

PRESCRIBE: Predicting Single-Cell Responses with Bayesian Estimation
por: Cheng, Jiabei, et al.
Publicado: (2025)

Better Protein Function Prediction by Modeling Survivorship Bias
por: Chao, Zhongmou, et al.
Publicado: (2026)

Graph Residual based Method for Molecular Property Prediction
por: Sen, Kanad, et al.
Publicado: (2024)

BAPULM: Binding Affinity Prediction using Language Models
por: Meda, Radheesh Sharma, et al.
Publicado: (2024)

Delivery strategies to improve piglets exposure to oral antibiotics
por: Hernández, Noslen, et al.
Publicado: (2024)

Sparse Autoencoders for Low-$N$ Protein Function Prediction and Design
por: Tsui, Darin, et al.
Publicado: (2025)

Boosted Random Forests for Predicting Treatment Failure of Chemotherapy Regimens
por: Shahid, Muhammad Usamah, et al.
Publicado: (2025)

AIRI: Predicting Retention Indices and their Uncertainties using Artificial Intelligence
por: Geer, Lewis Y., et al.
Publicado: (2024)

Learning Causally Predictable Outcomes from Psychiatric Longitudinal Data
por: Strobl, Eric V.
Publicado: (2025)

Predicting Emergency Department Visits for Patients with Type II Diabetes
por: Alizadeh, Javad M, et al.
Publicado: (2024)

Evaluating Molecule Synthesizability via Retrosynthetic Planning and Reaction Prediction
por: Liu, Songtao, et al.
Publicado: (2024)

Improving Prediction of Need for Mechanical Ventilation using Cross-Attention
por: Mohanty, Anwesh, et al.
Publicado: (2024)

Estimating Committor Functions via Deep Adaptive Sampling on Rare Transition Paths
por: Wang, Yueyang, et al.
Publicado: (2025)