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Main Authors: Hou, Xiangjian, Akcicek, Ebru Yaman, Wang, Xin, Hashemizadeh, Kazem, Mcnally, Scott, Yuan, Chun, Ma, Xiaodong
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2507.08214
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author Hou, Xiangjian
Akcicek, Ebru Yaman
Wang, Xin
Hashemizadeh, Kazem
Mcnally, Scott
Yuan, Chun
Ma, Xiaodong
author_facet Hou, Xiangjian
Akcicek, Ebru Yaman
Wang, Xin
Hashemizadeh, Kazem
Mcnally, Scott
Yuan, Chun
Ma, Xiaodong
contents While total intracranial carotid artery calcification (ICAC) volume is an established stroke biomarker, growing evidence shows this aggregate metric ignores the critical influence of plaque location, since calcification in different segments carries distinct prognostic and procedural risks. However, a finer-grained, segment-specific quantification has remained technically infeasible. Conventional 3D models are forced to process downsampled volumes or isolated patches, sacrificing the global context required to resolve anatomical ambiguity and render reliable landmark localization. To overcome this, we reformulate the 3D challenge as a \textbf{Parallel Probabilistic Landmark Localization} task along the 1D axial dimension. We propose the \textbf{Depth-Sequence Transformer (DST)}, a framework that processes full-resolution CT volumes as sequences of 2D slices, learning to predict $N=6$ independent probability distributions that pinpoint key anatomical landmarks. Our DST framework demonstrates exceptional accuracy and robustness. Evaluated on a 100-patient clinical cohort with rigorous 5-fold cross-validation, it achieves a Mean Absolute Error (MAE) of \textbf{0.1 slices}, with \textbf{96\%} of predictions falling within a $\pm1$ slice tolerance. Furthermore, to validate its architectural power, the DST backbone establishes the best result on the public Clean-CC-CCII classification benchmark under an end-to-end evaluation protocol. Our work delivers the first practical tool for automated segment-specific ICAC analysis. The proposed framework provides a foundation for further studies on the role of location-specific biomarkers in diagnosis, prognosis, and procedural planning.
format Preprint
id arxiv_https___arxiv_org_abs_2507_08214
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Depth-Sequence Transformer (DST) for Segment-Specific ICA Calcification Mapping on Non-Contrast CT
Hou, Xiangjian
Akcicek, Ebru Yaman
Wang, Xin
Hashemizadeh, Kazem
Mcnally, Scott
Yuan, Chun
Ma, Xiaodong
Image and Video Processing
Computer Vision and Pattern Recognition
While total intracranial carotid artery calcification (ICAC) volume is an established stroke biomarker, growing evidence shows this aggregate metric ignores the critical influence of plaque location, since calcification in different segments carries distinct prognostic and procedural risks. However, a finer-grained, segment-specific quantification has remained technically infeasible. Conventional 3D models are forced to process downsampled volumes or isolated patches, sacrificing the global context required to resolve anatomical ambiguity and render reliable landmark localization. To overcome this, we reformulate the 3D challenge as a \textbf{Parallel Probabilistic Landmark Localization} task along the 1D axial dimension. We propose the \textbf{Depth-Sequence Transformer (DST)}, a framework that processes full-resolution CT volumes as sequences of 2D slices, learning to predict $N=6$ independent probability distributions that pinpoint key anatomical landmarks. Our DST framework demonstrates exceptional accuracy and robustness. Evaluated on a 100-patient clinical cohort with rigorous 5-fold cross-validation, it achieves a Mean Absolute Error (MAE) of \textbf{0.1 slices}, with \textbf{96\%} of predictions falling within a $\pm1$ slice tolerance. Furthermore, to validate its architectural power, the DST backbone establishes the best result on the public Clean-CC-CCII classification benchmark under an end-to-end evaluation protocol. Our work delivers the first practical tool for automated segment-specific ICAC analysis. The proposed framework provides a foundation for further studies on the role of location-specific biomarkers in diagnosis, prognosis, and procedural planning.
title Depth-Sequence Transformer (DST) for Segment-Specific ICA Calcification Mapping on Non-Contrast CT
topic Image and Video Processing
Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2507.08214