Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM
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arXiv
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| Main Authors: | Gong, Chengyue, Chen, Xinshi, Zhang, Yuxuan, Song, Yuxuan, Zhou, Hao, Xiao, Wenzhi |
|---|---|
| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | |
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