Deep Neural Encoder-Decoder Model to Relate fMRI Brain Activity with Naturalistic Stimuli

Fuente: arXiv
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Autores principales: David, Florian, Chan, Michael, Morgenroth, Elenor, Vuilleumier, Patrik, Van De Ville, Dimitri
Formato: Preprint
Publicado: 2025
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author David, Florian
Chan, Michael
Morgenroth, Elenor
Vuilleumier, Patrik
Van De Ville, Dimitri
author_facet David, Florian
Chan, Michael
Morgenroth, Elenor
Vuilleumier, Patrik
Van De Ville, Dimitri
contents We propose an end-to-end deep neural encoder-decoder model to encode and decode brain activity in response to naturalistic stimuli using functional magnetic resonance imaging (fMRI) data. Leveraging temporally correlated input from consecutive film frames, we employ temporal convolutional layers in our architecture, which effectively allows to bridge the temporal resolution gap between natural movie stimuli and fMRI acquisitions. Our model predicts activity of voxels in and around the visual cortex and performs reconstruction of corresponding visual inputs from neural activity. Finally, we investigate brain regions contributing to visual decoding through saliency maps. We find that the most contributing regions are the middle occipital area, the fusiform area, and the calcarine, respectively employed in shape perception, complex recognition (in particular face perception), and basic visual features such as edges and contrasts. These functions being strongly solicited are in line with the decoder's capability to reconstruct edges, faces, and contrasts. All in all, this suggests the possibility to probe our understanding of visual processing in films using as a proxy the behaviour of deep learning models such as the one proposed in this paper.
format Preprint
id arxiv_https___arxiv_org_abs_2507_12009
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Deep Neural Encoder-Decoder Model to Relate fMRI Brain Activity with Naturalistic Stimuli
David, Florian
Chan, Michael
Morgenroth, Elenor
Vuilleumier, Patrik
Van De Ville, Dimitri
Computer Vision and Pattern Recognition
Human-Computer Interaction
We propose an end-to-end deep neural encoder-decoder model to encode and decode brain activity in response to naturalistic stimuli using functional magnetic resonance imaging (fMRI) data. Leveraging temporally correlated input from consecutive film frames, we employ temporal convolutional layers in our architecture, which effectively allows to bridge the temporal resolution gap between natural movie stimuli and fMRI acquisitions. Our model predicts activity of voxels in and around the visual cortex and performs reconstruction of corresponding visual inputs from neural activity. Finally, we investigate brain regions contributing to visual decoding through saliency maps. We find that the most contributing regions are the middle occipital area, the fusiform area, and the calcarine, respectively employed in shape perception, complex recognition (in particular face perception), and basic visual features such as edges and contrasts. These functions being strongly solicited are in line with the decoder's capability to reconstruct edges, faces, and contrasts. All in all, this suggests the possibility to probe our understanding of visual processing in films using as a proxy the behaviour of deep learning models such as the one proposed in this paper.
title Deep Neural Encoder-Decoder Model to Relate fMRI Brain Activity with Naturalistic Stimuli
topic Computer Vision and Pattern Recognition
Human-Computer Interaction
url https://arxiv.org/abs/2507.12009