A Comprehensive Survey of Electronic Health Record Modeling: From Deep Learning Approaches to Large Language Models

Fuente: arXiv
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Main Authors: Ren, Weijieying, Zhu, Jingxi, Liu, Zehao, Zhao, Tianxiang, Honavar, Vasant
Format: Preprint
Published: 2025
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author Ren, Weijieying
Zhu, Jingxi
Liu, Zehao
Zhao, Tianxiang
Honavar, Vasant
author_facet Ren, Weijieying
Zhu, Jingxi
Liu, Zehao
Zhao, Tianxiang
Honavar, Vasant
contents Artificial intelligence (AI) has demonstrated significant potential in transforming healthcare through the analysis and modeling of electronic health records (EHRs). However, the inherent heterogeneity, temporal irregularity, and domain-specific nature of EHR data present unique challenges that differ fundamentally from those in vision and natural language tasks. This survey offers a comprehensive overview of recent advancements at the intersection of deep learning, large language models (LLMs), and EHR modeling. We introduce a unified taxonomy that spans five key design dimensions: data-centric approaches, neural architecture design, learning-focused strategies, multimodal learning, and LLM-based modeling systems. Within each dimension, we review representative methods addressing data quality enhancement, structural and temporal representation, self-supervised learning, and integration with clinical knowledge. We further highlight emerging trends such as foundation models, LLM-driven clinical agents, and EHR-to-text translation for downstream reasoning. Finally, we discuss open challenges in benchmarking, explainability, clinical alignment, and generalization across diverse clinical settings. This survey aims to provide a structured roadmap for advancing AI-driven EHR modeling and clinical decision support. For a comprehensive list of EHR-related methods, kindly refer to https://survey-on-tabular-data.github.io/.
format Preprint
id arxiv_https___arxiv_org_abs_2507_12774
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle A Comprehensive Survey of Electronic Health Record Modeling: From Deep Learning Approaches to Large Language Models
Ren, Weijieying
Zhu, Jingxi
Liu, Zehao
Zhao, Tianxiang
Honavar, Vasant
Machine Learning
Artificial Intelligence
Computation and Language
Artificial intelligence (AI) has demonstrated significant potential in transforming healthcare through the analysis and modeling of electronic health records (EHRs). However, the inherent heterogeneity, temporal irregularity, and domain-specific nature of EHR data present unique challenges that differ fundamentally from those in vision and natural language tasks. This survey offers a comprehensive overview of recent advancements at the intersection of deep learning, large language models (LLMs), and EHR modeling. We introduce a unified taxonomy that spans five key design dimensions: data-centric approaches, neural architecture design, learning-focused strategies, multimodal learning, and LLM-based modeling systems. Within each dimension, we review representative methods addressing data quality enhancement, structural and temporal representation, self-supervised learning, and integration with clinical knowledge. We further highlight emerging trends such as foundation models, LLM-driven clinical agents, and EHR-to-text translation for downstream reasoning. Finally, we discuss open challenges in benchmarking, explainability, clinical alignment, and generalization across diverse clinical settings. This survey aims to provide a structured roadmap for advancing AI-driven EHR modeling and clinical decision support. For a comprehensive list of EHR-related methods, kindly refer to https://survey-on-tabular-data.github.io/.
title A Comprehensive Survey of Electronic Health Record Modeling: From Deep Learning Approaches to Large Language Models
topic Machine Learning
Artificial Intelligence
Computation and Language
url https://arxiv.org/abs/2507.12774