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Main Authors: Albertsen, Simon Winther, Bjørnstrup, Hjalte Svaneborg, Ghazi, Mostafa Mehdipour
Format: Preprint
Published: 2025
Subjects:
Online Access:https://arxiv.org/abs/2507.15524
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author Albertsen, Simon Winther
Bjørnstrup, Hjalte Svaneborg
Ghazi, Mostafa Mehdipour
author_facet Albertsen, Simon Winther
Bjørnstrup, Hjalte Svaneborg
Ghazi, Mostafa Mehdipour
contents Accurate segmentation is crucial for clinical applications, but existing models often assume fixed, high-resolution inputs and degrade significantly when faced with lower-resolution data in real-world scenarios. To address this limitation, we propose RARE-UNet, a resolution-aware multi-scale segmentation architecture that dynamically adapts its inference path to the spatial resolution of the input. Central to our design are multi-scale blocks integrated at multiple encoder depths, a resolution-aware routing mechanism, and consistency-driven training that aligns multi-resolution features with full-resolution representations. We evaluate RARE-UNet on two benchmark brain imaging tasks for hippocampus and tumor segmentation. Compared to standard UNet, its multi-resolution augmented variant, and nnUNet, our model achieves the highest average Dice scores of 0.84 and 0.65 across resolution, while maintaining consistent performance and significantly reduced inference time at lower resolutions. These results highlight the effectiveness and scalability of our architecture in achieving resolution-robust segmentation. The codes are available at: https://github.com/simonsejse/RARE-UNet.
format Preprint
id arxiv_https___arxiv_org_abs_2507_15524
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle RARE-UNet: Resolution-Aligned Routing Entry for Adaptive Medical Image Segmentation
Albertsen, Simon Winther
Bjørnstrup, Hjalte Svaneborg
Ghazi, Mostafa Mehdipour
Image and Video Processing
Artificial Intelligence
Computer Vision and Pattern Recognition
Accurate segmentation is crucial for clinical applications, but existing models often assume fixed, high-resolution inputs and degrade significantly when faced with lower-resolution data in real-world scenarios. To address this limitation, we propose RARE-UNet, a resolution-aware multi-scale segmentation architecture that dynamically adapts its inference path to the spatial resolution of the input. Central to our design are multi-scale blocks integrated at multiple encoder depths, a resolution-aware routing mechanism, and consistency-driven training that aligns multi-resolution features with full-resolution representations. We evaluate RARE-UNet on two benchmark brain imaging tasks for hippocampus and tumor segmentation. Compared to standard UNet, its multi-resolution augmented variant, and nnUNet, our model achieves the highest average Dice scores of 0.84 and 0.65 across resolution, while maintaining consistent performance and significantly reduced inference time at lower resolutions. These results highlight the effectiveness and scalability of our architecture in achieving resolution-robust segmentation. The codes are available at: https://github.com/simonsejse/RARE-UNet.
title RARE-UNet: Resolution-Aligned Routing Entry for Adaptive Medical Image Segmentation
topic Image and Video Processing
Artificial Intelligence
Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2507.15524