Co-optimization of codon usage and mRNA secondary structure using quantum computing
Fuente:
arXiv
Saved in:
| Main Authors: | Alevras, Dimitris, Metkar, Mihir, Friedhoff, Triet, Park, Jae-Eun, LaDue, Mariana, Kumar, Vaibhaw, Davis, Wade, Galda, Alexey |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
mRNA secondary structure prediction using utility-scale quantum computers
by: Alevras, Dimitris, et al.
Published: (2024)
by: Alevras, Dimitris, et al.
Published: (2024)
Towards secondary structure prediction of longer mRNA sequences using a quantum-centric optimization scheme
by: Kumar, Vaibhaw, et al.
Published: (2025)
by: Kumar, Vaibhaw, et al.
Published: (2025)
Pauli Correlation Encoding for mRNA Secondary Structure Prediction: Problem-Aware Decoding for Dense-Constraint QUBOs
by: Friedhoff, Triet, et al.
Published: (2026)
by: Friedhoff, Triet, et al.
Published: (2026)
mRNA Folding Algorithms for Structure and Codon Optimization
by: Ward, Max, et al.
Published: (2025)
by: Ward, Max, et al.
Published: (2025)
Males Matter: On the Status and Future Direction of Male Elephant Management in EAZA Institutions
by: Chase A. LaDue, et al.
Published: (2025)
by: Chase A. LaDue, et al.
Published: (2025)
A resource-efficient variational quantum algorithm for mRNA codon optimization
by: Zhang, Hongfeng, et al.
Published: (2024)
by: Zhang, Hongfeng, et al.
Published: (2024)
Sample-based Quantum Diagonalization Methods for Modeling the Photochemistry of Diazirine and Diazo Compounds
by: Shivpuje, Saurabh, et al.
Published: (2025)
by: Shivpuje, Saurabh, et al.
Published: (2025)
Male elephant management in AZA institutions: Current status and priorities for the future
by: Chase A. LaDue, et al.
Published: (2024)
by: Chase A. LaDue, et al.
Published: (2024)
Cellular Automata: From Structural Principles to Transport and Correlation Methods
by: Metkar, Mihir, et al.
Published: (2026)
by: Metkar, Mihir, et al.
Published: (2026)
Portfolio construction using a sampling-based variational quantum scheme
by: Agliardi, Gabriele, et al.
Published: (2025)
by: Agliardi, Gabriele, et al.
Published: (2025)
“I feel listened to and heard”: How social support fosters a sense of belonging for low‐income STEM majors
by: Madison R. Payne, et al.
Published: (2024)
by: Madison R. Payne, et al.
Published: (2024)
Legacy Genomic codon usage Computational Demonstration and Data: Depreciated
by: Moore, Douglas Joseph Huntington
Published: (2026)
by: Moore, Douglas Joseph Huntington
Published: (2026)
Pepino mosaic virus: Recombination, spatiotemporal divergence and codon usage
by: Mei He, et al.
Published: (2024)
by: Mei He, et al.
Published: (2024)
mRNA2vec: mRNA Embedding with Language Model in the 5'UTR-CDS for mRNA Design
by: Zhang, Honggen, et al.
Published: (2024)
by: Zhang, Honggen, et al.
Published: (2024)
cubar: a versatile package for codon usage bias analysis in R
by: Liu, Mengyue, et al.
Published: (2024)
by: Liu, Mengyue, et al.
Published: (2024)
Targeted introduction of premature stop codon in plant mitochondrial mRNA by a designer pentatricopeptide repeat protein with C‐to‐U editing function
by: Nikolay Manavski, et al.
Published: (2025)
by: Nikolay Manavski, et al.
Published: (2025)
Concentration Approaches for mRNA and mRNA–LNP Formulations: Enabling mRNA Integrity Quantification in Low‐Concentration Formulations
by: Shang‐Yin Wu, et al.
Published: (2026)
by: Shang‐Yin Wu, et al.
Published: (2026)
Self‐Amplifying mRNA Enhances Transamniotic Fetal mRNA Delivery
by: Alex L. Huang, et al.
Published: (2026)
by: Alex L. Huang, et al.
Published: (2026)
Insights into the formulation of lipid nanoparticles for the optimization of mRNA therapeutics
by: Xiangyu Jiao, et al.
Published: (2024)
by: Xiangyu Jiao, et al.
Published: (2024)
Translation of the downstream ORF from bicistronic mRNAs by human cells: Impact of codon usage and splicing in the upstream ORF
by: Philippe Paget‐Bailly, et al.
Published: (2025)
by: Philippe Paget‐Bailly, et al.
Published: (2025)
Equi-mRNA: Protein Translation Equivariant Encoding for mRNA Language Models
by: Yazdani-Jahromi, Mehdi, et al.
Published: (2025)
by: Yazdani-Jahromi, Mehdi, et al.
Published: (2025)
Managing Musth for Welfare in a Geriatric Asian Elephant: Behavioral and Hormonal Effects of an Anti‐GnRH Immunotherapeutic
by: Chase A. LaDue, et al.
Published: (2026)
by: Chase A. LaDue, et al.
Published: (2026)
Direct RNA sequence design under codon constraints using expressive tensor-based secondary structure models
by: Fornace, Mark, et al.
Published: (2026)
by: Fornace, Mark, et al.
Published: (2026)
Polymers for mRNA Delivery
by: Hui Wang, et al.
Published: (2025)
by: Hui Wang, et al.
Published: (2025)
Helix-mRNA: A Hybrid Foundation Model For Full Sequence mRNA Therapeutics
by: Wood, Matthew, et al.
Published: (2025)
by: Wood, Matthew, et al.
Published: (2025)
Chemical Stability of mRNA/cDNA Complexes: Defining the Limits of mRNA Display
by: Ryoji Yoshisada, et al.
Published: (2024)
by: Ryoji Yoshisada, et al.
Published: (2024)
MRSLpred: A computational tool for multilabel mRNA subcellular localization prediction
by: Choudhury, Shubham, et al.
Published: (2026)
by: Choudhury, Shubham, et al.
Published: (2026)
A strategy for successful dual‐species protein expression of genes with non‐optimal codon usage destined for bacterial and yeast cell factories
by: Marcus Wäneskog, et al.
Published: (2024)
by: Marcus Wäneskog, et al.
Published: (2024)
Exploring computational approaches to design mRNA Vaccine against vaccinia and Mpox viruses
by: Elijah K. Oladipo, et al.
Published: (2024)
by: Elijah K. Oladipo, et al.
Published: (2024)
RNA editing generates mRNA isoforms with distinct stabilities that may expand the thermal tolerance of mRNA and proteins in species.
by: Liao, Ming-Ling, et al.
Published: (2025)
by: Liao, Ming-Ling, et al.
Published: (2025)
The Promise of Environmental RNA Research Beyond mRNA
by: Ehsan Pashay Ahi, et al.
Published: (2025)
by: Ehsan Pashay Ahi, et al.
Published: (2025)
Translational kinetic‐pharmacodynamics of mRNA‐6231, an investigational mRNA therapeutic encoding mutein interleukin‐2
by: Ivana Liric Rajlic, et al.
Published: (2024)
by: Ivana Liric Rajlic, et al.
Published: (2024)
Enhanced Intracellular Stability and Translation Efficiency of mRNA Drugs by a 2‐arm mRNA Platform
by: Xucong Teng, et al.
Published: (2026)
by: Xucong Teng, et al.
Published: (2026)
ACE mRNA (Additional Chimeric Element incorporated IVT mRNA) for Enhancing Protein Expression by Modulating Immunogenicity
by: Sora Son, et al.
Published: (2024)
by: Sora Son, et al.
Published: (2024)
Pre-trained protein language model for codon optimization
by: Pathak, Shashank, et al.
Published: (2024)
by: Pathak, Shashank, et al.
Published: (2024)
mRNA-Transkriptionsdaten-Masterarbeit-V.M.
by: Michaelis, Viktor
Published: (2026)
by: Michaelis, Viktor
Published: (2026)
Immune thrombocytopenic purpura following mRNA-
by: Heiler Lozada-Ramos
Published: (2024)
by: Heiler Lozada-Ramos
Published: (2024)
The spectrum of pre‐mRNA splicing in autism
by: Eden Engal, et al.
Published: (2024)
by: Eden Engal, et al.
Published: (2024)
Therapeutic Application of mRNA for Genetic Diseases
by: Paul J. L. Schürmann, et al.
Published: (2025)
by: Paul J. L. Schürmann, et al.
Published: (2025)
Engineering Lipid Nanoparticles for mRNA Immunotherapy
by: Robby Zwolsman, et al.
Published: (2025)
by: Robby Zwolsman, et al.
Published: (2025)
Similar Items
-
mRNA secondary structure prediction using utility-scale quantum computers
by: Alevras, Dimitris, et al.
Published: (2024) -
Towards secondary structure prediction of longer mRNA sequences using a quantum-centric optimization scheme
by: Kumar, Vaibhaw, et al.
Published: (2025) -
Pauli Correlation Encoding for mRNA Secondary Structure Prediction: Problem-Aware Decoding for Dense-Constraint QUBOs
by: Friedhoff, Triet, et al.
Published: (2026) -
mRNA Folding Algorithms for Structure and Codon Optimization
by: Ward, Max, et al.
Published: (2025) -
Males Matter: On the Status and Future Direction of Male Elephant Management in EAZA Institutions
by: Chase A. LaDue, et al.
Published: (2025)