The Hands-On Growth Laws Theory Cookbook

Fuente: arXiv
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Autori principali: Droghetti, Rossana, Corigliano, Mattia, Calabrese, Ludovico, Fuchs, Philippe, Vaidyanathan, Abhishek, Keisers, Johannes, Micali, Gabriele, Lagomarsino, Marco Cosentino, Ciandrini, Luca
Natura: Preprint
Pubblicazione: 2025
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author Droghetti, Rossana
Corigliano, Mattia
Calabrese, Ludovico
Fuchs, Philippe
Vaidyanathan, Abhishek
Keisers, Johannes
Micali, Gabriele
Lagomarsino, Marco Cosentino
Ciandrini, Luca
author_facet Droghetti, Rossana
Corigliano, Mattia
Calabrese, Ludovico
Fuchs, Philippe
Vaidyanathan, Abhishek
Keisers, Johannes
Micali, Gabriele
Lagomarsino, Marco Cosentino
Ciandrini, Luca
contents This tutorial covers the emerging field of coarse-grained cellular growth modeling, and aims to bridge the gap between theoretical foundations and practical application. By adopting an original "cookbook" approach, it is designed to offer a hands-on guide for constructing and analyzing different key aspects of cellular growth, focusing on available results for bacteria and beyond. The tutorial is structured as a series of step-by-step "recipes", and covers essential concepts, recent literature, and key challenges. It aims to empower a broad audience, from students to seasoned researchers, to replicate, extend, and innovate in this scientific area. Specifically, each section provides detailed, bare-bone models to start working in each area, from basic steady-state growth to variable environments and focusing on different key layers relevant to biosynthesis, transcription, translation, nutrient sensing and protein degradation, links between cell cycle and growth, ending with ecological insights.
format Preprint
id arxiv_https___arxiv_org_abs_2507_19194
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle The Hands-On Growth Laws Theory Cookbook
Droghetti, Rossana
Corigliano, Mattia
Calabrese, Ludovico
Fuchs, Philippe
Vaidyanathan, Abhishek
Keisers, Johannes
Micali, Gabriele
Lagomarsino, Marco Cosentino
Ciandrini, Luca
Other Quantitative Biology
Biological Physics
This tutorial covers the emerging field of coarse-grained cellular growth modeling, and aims to bridge the gap between theoretical foundations and practical application. By adopting an original "cookbook" approach, it is designed to offer a hands-on guide for constructing and analyzing different key aspects of cellular growth, focusing on available results for bacteria and beyond. The tutorial is structured as a series of step-by-step "recipes", and covers essential concepts, recent literature, and key challenges. It aims to empower a broad audience, from students to seasoned researchers, to replicate, extend, and innovate in this scientific area. Specifically, each section provides detailed, bare-bone models to start working in each area, from basic steady-state growth to variable environments and focusing on different key layers relevant to biosynthesis, transcription, translation, nutrient sensing and protein degradation, links between cell cycle and growth, ending with ecological insights.
title The Hands-On Growth Laws Theory Cookbook
topic Other Quantitative Biology
Biological Physics
url https://arxiv.org/abs/2507.19194