Investigating the Role of pH and Counterions in the Intrinsic Fluorescence of Solid-State L-Lysine

Fuente: arXiv
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Main Authors: Monti, Marta, Cimmino, Luca, Mirón, Gonzalo Díaz, Diaferia, Carlo, Banerjee, Debarshi, Stella, Martina, Vitagliano, Luigi, Accardo, Antonella, Hassanali, Ali
Format: Preprint
Published: 2025
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author Monti, Marta
Cimmino, Luca
Mirón, Gonzalo Díaz
Diaferia, Carlo
Banerjee, Debarshi
Stella, Martina
Vitagliano, Luigi
Accardo, Antonella
Hassanali, Ali
author_facet Monti, Marta
Cimmino, Luca
Mirón, Gonzalo Díaz
Diaferia, Carlo
Banerjee, Debarshi
Stella, Martina
Vitagliano, Luigi
Accardo, Antonella
Hassanali, Ali
contents There is currently a growing interest in understanding the origins of intrinsic fluorescence as a way to design non-invasive probes for biophysical processes. In this regard, understanding how pH influences fluorescence in non-aromatic biomolecular assemblies is key to controlling their optical properties in realistic cellular conditions. Here, we combine experiments and theory to investigate the pH-dependent emission of solid-state L-Lysine (Lys). Lys aggregates prepared at different pH values using HCl and H$_2$SO$_4$ exhibit protonation- and counterion-dependent morphology and fluorescence, as shown by microscopy and steady-state measurements. We find an enhancement in the fluorescence moving from acidic to basic conditions. To uncover the molecular origin of these trends, we performed non-adiabatic molecular dynamics simulations on three Lys crystal models representing distinct protonation states. Our simulations indicate that enhanced protonation under acidic conditions facilitates non-radiative decay via proton transfer, whereas basic conditions favor radiative decay. Our combined experimental-theoretical work highlights pH and counterion identity as key factors tuning fluorescence in Lys assemblies, offering insights for designing pH responsive optical materials based on non-aromatic amino acids.
format Preprint
id arxiv_https___arxiv_org_abs_2507_19241
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Investigating the Role of pH and Counterions in the Intrinsic Fluorescence of Solid-State L-Lysine
Monti, Marta
Cimmino, Luca
Mirón, Gonzalo Díaz
Diaferia, Carlo
Banerjee, Debarshi
Stella, Martina
Vitagliano, Luigi
Accardo, Antonella
Hassanali, Ali
Chemical Physics
Biological Physics
There is currently a growing interest in understanding the origins of intrinsic fluorescence as a way to design non-invasive probes for biophysical processes. In this regard, understanding how pH influences fluorescence in non-aromatic biomolecular assemblies is key to controlling their optical properties in realistic cellular conditions. Here, we combine experiments and theory to investigate the pH-dependent emission of solid-state L-Lysine (Lys). Lys aggregates prepared at different pH values using HCl and H$_2$SO$_4$ exhibit protonation- and counterion-dependent morphology and fluorescence, as shown by microscopy and steady-state measurements. We find an enhancement in the fluorescence moving from acidic to basic conditions. To uncover the molecular origin of these trends, we performed non-adiabatic molecular dynamics simulations on three Lys crystal models representing distinct protonation states. Our simulations indicate that enhanced protonation under acidic conditions facilitates non-radiative decay via proton transfer, whereas basic conditions favor radiative decay. Our combined experimental-theoretical work highlights pH and counterion identity as key factors tuning fluorescence in Lys assemblies, offering insights for designing pH responsive optical materials based on non-aromatic amino acids.
title Investigating the Role of pH and Counterions in the Intrinsic Fluorescence of Solid-State L-Lysine
topic Chemical Physics
Biological Physics
url https://arxiv.org/abs/2507.19241