Medical Image De-Identification Benchmark Challenge

Fuente: arXiv
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Main Authors: Pei, Linmin, Sutton, Granger, Rutherford, Michael, Wagner, Ulrike, Nolan, Tracy, Smith, Kirk, Farmer, Phillip, Gu, Peter, Rana, Ambar, Chen, Kailing, Ferleman, Thomas, Park, Brian, Wu, Ye, Kojouharov, Jordan, Singh, Gargi, Lemon, Jon, Willis, Tyler, Vukadinovic, Milos, Duffy, Grant, He, Bryan, Ouyang, David, Pereanez, Marco, Samber, Daniel, Smith, Derek A., Cannistraci, Christopher, Fayad, Zahi, Mendelson, David S., Bufano, Michele, Kotter, Elmar, Haghiri, Hamideh, Baidya, Rajesh, Dvoretskii, Stefan, Maier-Hein, Klaus H., Nolden, Marco, Ablett, Christopher, Siggillino, Silvia, Kaushik, Sandeep, Jiang, Hongzhu, Xie, Sihan, Wan, Zhiyu, Michie, Alex, Doran, Simon J, Waly, Angeline Aurelia, Liang, Felix A. Nathaniel, Mustagfirin, Humam Arshad, Felicia, Michelle Grace, Chih, Kuo Po, Krish, Rahul, Rasool, Ghulam, Bouaynaya, Nidhal, Koutsoubis, Nikolas, Naddeo, Kyle, Pandit, Kartik, O'Sullivan, Tony, Krish, Raj, Pan, Qinyan, Gustafson, Scott, Kopchick, Benjamin, Opsahl-Ong, Laura, Olvera-Morales, Andrea, Pinney, Jonathan, Johnson, Kathryn, Do, Theresa, Klenk, Juergen, Diaz, Maria, Singh, Arti, Chai, Rong, Clunie, David A., Prior, Fred, Farahani, Keyvan
Format: Preprint
Published: 2025
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author Pei, Linmin
Sutton, Granger
Rutherford, Michael
Wagner, Ulrike
Nolan, Tracy
Smith, Kirk
Farmer, Phillip
Gu, Peter
Rana, Ambar
Chen, Kailing
Ferleman, Thomas
Park, Brian
Wu, Ye
Kojouharov, Jordan
Singh, Gargi
Lemon, Jon
Willis, Tyler
Vukadinovic, Milos
Duffy, Grant
He, Bryan
Ouyang, David
Pereanez, Marco
Samber, Daniel
Smith, Derek A.
Cannistraci, Christopher
Fayad, Zahi
Mendelson, David S.
Bufano, Michele
Kotter, Elmar
Haghiri, Hamideh
Baidya, Rajesh
Dvoretskii, Stefan
Maier-Hein, Klaus H.
Nolden, Marco
Ablett, Christopher
Siggillino, Silvia
Kaushik, Sandeep
Jiang, Hongzhu
Xie, Sihan
Wan, Zhiyu
Michie, Alex
Doran, Simon J
Waly, Angeline Aurelia
Liang, Felix A. Nathaniel
Mustagfirin, Humam Arshad
Felicia, Michelle Grace
Chih, Kuo Po
Krish, Rahul
Rasool, Ghulam
Bouaynaya, Nidhal
Koutsoubis, Nikolas
Naddeo, Kyle
Pandit, Kartik
O'Sullivan, Tony
Krish, Raj
Pan, Qinyan
Gustafson, Scott
Kopchick, Benjamin
Opsahl-Ong, Laura
Olvera-Morales, Andrea
Pinney, Jonathan
Johnson, Kathryn
Do, Theresa
Klenk, Juergen
Diaz, Maria
Singh, Arti
Chai, Rong
Clunie, David A.
Prior, Fred
Farahani, Keyvan
author_facet Pei, Linmin
Sutton, Granger
Rutherford, Michael
Wagner, Ulrike
Nolan, Tracy
Smith, Kirk
Farmer, Phillip
Gu, Peter
Rana, Ambar
Chen, Kailing
Ferleman, Thomas
Park, Brian
Wu, Ye
Kojouharov, Jordan
Singh, Gargi
Lemon, Jon
Willis, Tyler
Vukadinovic, Milos
Duffy, Grant
He, Bryan
Ouyang, David
Pereanez, Marco
Samber, Daniel
Smith, Derek A.
Cannistraci, Christopher
Fayad, Zahi
Mendelson, David S.
Bufano, Michele
Kotter, Elmar
Haghiri, Hamideh
Baidya, Rajesh
Dvoretskii, Stefan
Maier-Hein, Klaus H.
Nolden, Marco
Ablett, Christopher
Siggillino, Silvia
Kaushik, Sandeep
Jiang, Hongzhu
Xie, Sihan
Wan, Zhiyu
Michie, Alex
Doran, Simon J
Waly, Angeline Aurelia
Liang, Felix A. Nathaniel
Mustagfirin, Humam Arshad
Felicia, Michelle Grace
Chih, Kuo Po
Krish, Rahul
Rasool, Ghulam
Bouaynaya, Nidhal
Koutsoubis, Nikolas
Naddeo, Kyle
Pandit, Kartik
O'Sullivan, Tony
Krish, Raj
Pan, Qinyan
Gustafson, Scott
Kopchick, Benjamin
Opsahl-Ong, Laura
Olvera-Morales, Andrea
Pinney, Jonathan
Johnson, Kathryn
Do, Theresa
Klenk, Juergen
Diaz, Maria
Singh, Arti
Chai, Rong
Clunie, David A.
Prior, Fred
Farahani, Keyvan
contents The de-identification (deID) of protected health information (PHI) and personally identifiable information (PII) is a fundamental requirement for sharing medical images, particularly through public repositories, to ensure compliance with patient privacy laws. In addition, preservation of non-PHI metadata to inform and enable downstream development of imaging artificial intelligence (AI) is an important consideration in biomedical research. The goal of MIDI-B was to provide a standardized platform for benchmarking of DICOM image deID tools based on a set of rules conformant to the HIPAA Safe Harbor regulation, the DICOM Attribute Confidentiality Profiles, and best practices in preservation of research-critical metadata, as defined by The Cancer Imaging Archive (TCIA). The challenge employed a large, diverse, multi-center, and multi-modality set of real de-identified radiology images with synthetic PHI/PII inserted. The MIDI-B Challenge consisted of three phases: training, validation, and test. Eighty individuals registered for the challenge. In the training phase, we encouraged participants to tune their algorithms using their in-house or public data. The validation and test phases utilized the DICOM images containing synthetic identifiers (of 216 and 322 subjects, respectively). Ten teams successfully completed the test phase of the challenge. To measure success of a rule-based approach to image deID, scores were computed as the percentage of correct actions from the total number of required actions. The scores ranged from 97.91% to 99.93%. Participants employed a variety of open-source and proprietary tools with customized configurations, large language models, and optical character recognition (OCR). In this paper we provide a comprehensive report on the MIDI-B Challenge's design, implementation, results, and lessons learned.
format Preprint
id arxiv_https___arxiv_org_abs_2507_23608
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Medical Image De-Identification Benchmark Challenge
Pei, Linmin
Sutton, Granger
Rutherford, Michael
Wagner, Ulrike
Nolan, Tracy
Smith, Kirk
Farmer, Phillip
Gu, Peter
Rana, Ambar
Chen, Kailing
Ferleman, Thomas
Park, Brian
Wu, Ye
Kojouharov, Jordan
Singh, Gargi
Lemon, Jon
Willis, Tyler
Vukadinovic, Milos
Duffy, Grant
He, Bryan
Ouyang, David
Pereanez, Marco
Samber, Daniel
Smith, Derek A.
Cannistraci, Christopher
Fayad, Zahi
Mendelson, David S.
Bufano, Michele
Kotter, Elmar
Haghiri, Hamideh
Baidya, Rajesh
Dvoretskii, Stefan
Maier-Hein, Klaus H.
Nolden, Marco
Ablett, Christopher
Siggillino, Silvia
Kaushik, Sandeep
Jiang, Hongzhu
Xie, Sihan
Wan, Zhiyu
Michie, Alex
Doran, Simon J
Waly, Angeline Aurelia
Liang, Felix A. Nathaniel
Mustagfirin, Humam Arshad
Felicia, Michelle Grace
Chih, Kuo Po
Krish, Rahul
Rasool, Ghulam
Bouaynaya, Nidhal
Koutsoubis, Nikolas
Naddeo, Kyle
Pandit, Kartik
O'Sullivan, Tony
Krish, Raj
Pan, Qinyan
Gustafson, Scott
Kopchick, Benjamin
Opsahl-Ong, Laura
Olvera-Morales, Andrea
Pinney, Jonathan
Johnson, Kathryn
Do, Theresa
Klenk, Juergen
Diaz, Maria
Singh, Arti
Chai, Rong
Clunie, David A.
Prior, Fred
Farahani, Keyvan
Computer Vision and Pattern Recognition
Cryptography and Security
The de-identification (deID) of protected health information (PHI) and personally identifiable information (PII) is a fundamental requirement for sharing medical images, particularly through public repositories, to ensure compliance with patient privacy laws. In addition, preservation of non-PHI metadata to inform and enable downstream development of imaging artificial intelligence (AI) is an important consideration in biomedical research. The goal of MIDI-B was to provide a standardized platform for benchmarking of DICOM image deID tools based on a set of rules conformant to the HIPAA Safe Harbor regulation, the DICOM Attribute Confidentiality Profiles, and best practices in preservation of research-critical metadata, as defined by The Cancer Imaging Archive (TCIA). The challenge employed a large, diverse, multi-center, and multi-modality set of real de-identified radiology images with synthetic PHI/PII inserted. The MIDI-B Challenge consisted of three phases: training, validation, and test. Eighty individuals registered for the challenge. In the training phase, we encouraged participants to tune their algorithms using their in-house or public data. The validation and test phases utilized the DICOM images containing synthetic identifiers (of 216 and 322 subjects, respectively). Ten teams successfully completed the test phase of the challenge. To measure success of a rule-based approach to image deID, scores were computed as the percentage of correct actions from the total number of required actions. The scores ranged from 97.91% to 99.93%. Participants employed a variety of open-source and proprietary tools with customized configurations, large language models, and optical character recognition (OCR). In this paper we provide a comprehensive report on the MIDI-B Challenge's design, implementation, results, and lessons learned.
title Medical Image De-Identification Benchmark Challenge
topic Computer Vision and Pattern Recognition
Cryptography and Security
url https://arxiv.org/abs/2507.23608