A multi-stage Bayesian approach to fit spatial point process models

Fuente: arXiv
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Autori principali: Ren, Rachael, Hooten, Mevin B., Schafer, Toryn L. J., Calzada, Nicholas M., Hoose, Benjamin, Womble, Jamie N., Gende, Scott
Natura: Preprint
Pubblicazione: 2025
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author Ren, Rachael
Hooten, Mevin B.
Schafer, Toryn L. J.
Calzada, Nicholas M.
Hoose, Benjamin
Womble, Jamie N.
Gende, Scott
author_facet Ren, Rachael
Hooten, Mevin B.
Schafer, Toryn L. J.
Calzada, Nicholas M.
Hoose, Benjamin
Womble, Jamie N.
Gende, Scott
contents Spatial point process (SPP) models are commonly used to analyze point pattern data in many fields, including presence-only data in ecology. Existing exact Bayesian methods for fitting these models are computationally expensive because they require approximating an intractable integral each time parameters are updated and often involve algorithm supervision (i.e., tuning in the Bayesian setting). We propose a flexible, efficient, and exact multi-stage recursive Bayesian approach to fitting SPP models that leverages parallel computing resources to obtain realizations from the joint posterior, which can then be used to obtain inference on derived quantities. We outline potential extensions, including a framework for analyzing study designs with compact observation windows and a neural network basis expansion for increased model flexibility. We demonstrate this approach and its extensions using a simulation study and analyze data from aerial imagery surveys to improve our understanding of spatially explicit abundance of harbor seal (Phoca vitulina) pups in Johns Hopkins Inlet, a protected tidewater glacial fjord in Glacier Bay National Park, Alaska.
format Preprint
id arxiv_https___arxiv_org_abs_2508_02922
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle A multi-stage Bayesian approach to fit spatial point process models
Ren, Rachael
Hooten, Mevin B.
Schafer, Toryn L. J.
Calzada, Nicholas M.
Hoose, Benjamin
Womble, Jamie N.
Gende, Scott
Methodology
Spatial point process (SPP) models are commonly used to analyze point pattern data in many fields, including presence-only data in ecology. Existing exact Bayesian methods for fitting these models are computationally expensive because they require approximating an intractable integral each time parameters are updated and often involve algorithm supervision (i.e., tuning in the Bayesian setting). We propose a flexible, efficient, and exact multi-stage recursive Bayesian approach to fitting SPP models that leverages parallel computing resources to obtain realizations from the joint posterior, which can then be used to obtain inference on derived quantities. We outline potential extensions, including a framework for analyzing study designs with compact observation windows and a neural network basis expansion for increased model flexibility. We demonstrate this approach and its extensions using a simulation study and analyze data from aerial imagery surveys to improve our understanding of spatially explicit abundance of harbor seal (Phoca vitulina) pups in Johns Hopkins Inlet, a protected tidewater glacial fjord in Glacier Bay National Park, Alaska.
title A multi-stage Bayesian approach to fit spatial point process models
topic Methodology
url https://arxiv.org/abs/2508.02922