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Hauptverfasser: Kalisch, Hamza, Hörst, Fabian, Kleesiek, Jens, Herrmann, Ken, Seibold, Constantin
Format: Preprint
Veröffentlicht: 2025
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Online-Zugang:https://arxiv.org/abs/2508.05375
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author Kalisch, Hamza
Hörst, Fabian
Kleesiek, Jens
Herrmann, Ken
Seibold, Constantin
author_facet Kalisch, Hamza
Hörst, Fabian
Kleesiek, Jens
Herrmann, Ken
Seibold, Constantin
contents As medical imaging is central to diagnostic processes, automating the generation of radiology reports has become increasingly relevant to assist radiologists with their heavy workloads. Most current methods rely solely on global image features, failing to capture fine-grained organ relationships crucial for accurate reporting. To this end, we propose CT-GRAPH, a hierarchical graph attention network that explicitly models radiological knowledge by structuring anatomical regions into a graph, linking fine-grained organ features to coarser anatomical systems and a global patient context. Our method leverages pretrained 3D medical feature encoders to obtain global and organ-level features by utilizing anatomical masks. These features are further refined within the graph and then integrated into a large language model to generate detailed medical reports. We evaluate our approach for the task of report generation on the large-scale chest CT dataset CT-RATE. We provide an in-depth analysis of pretrained feature encoders for CT report generation and show that our method achieves a substantial improvement of absolute 7.9\% in F1 score over current state-of-the-art methods. The code is publicly available at https://github.com/hakal104/CT-GRAPH.
format Preprint
id arxiv_https___arxiv_org_abs_2508_05375
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle CT-GRAPH: Hierarchical Graph Attention Network for Anatomy-Guided CT Report Generation
Kalisch, Hamza
Hörst, Fabian
Kleesiek, Jens
Herrmann, Ken
Seibold, Constantin
Computer Vision and Pattern Recognition
As medical imaging is central to diagnostic processes, automating the generation of radiology reports has become increasingly relevant to assist radiologists with their heavy workloads. Most current methods rely solely on global image features, failing to capture fine-grained organ relationships crucial for accurate reporting. To this end, we propose CT-GRAPH, a hierarchical graph attention network that explicitly models radiological knowledge by structuring anatomical regions into a graph, linking fine-grained organ features to coarser anatomical systems and a global patient context. Our method leverages pretrained 3D medical feature encoders to obtain global and organ-level features by utilizing anatomical masks. These features are further refined within the graph and then integrated into a large language model to generate detailed medical reports. We evaluate our approach for the task of report generation on the large-scale chest CT dataset CT-RATE. We provide an in-depth analysis of pretrained feature encoders for CT report generation and show that our method achieves a substantial improvement of absolute 7.9\% in F1 score over current state-of-the-art methods. The code is publicly available at https://github.com/hakal104/CT-GRAPH.
title CT-GRAPH: Hierarchical Graph Attention Network for Anatomy-Guided CT Report Generation
topic Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2508.05375