A Structural Analysis of Population Graphs

Fuente: arXiv
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Autori principali: Ayers, Kimberly, Kooiker, Maxwell
Natura: Preprint
Pubblicazione: 2025
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author Ayers, Kimberly
Kooiker, Maxwell
author_facet Ayers, Kimberly
Kooiker, Maxwell
contents The format of graphing algorithms for genomic data has been a debate in recent biotechnology. In this paper, we discuss the construction of population graphs using said genomic data. We first examine the GENPOFAD distance measurement, developed by Joly et. al., and prove that this constitutes a metric function. We develop an algorithm to construct graphs to visualize the relationships between individuals in a population. We then provide a statistical analysis of these simulated population graphs, and show that they are distinct from randomly generated graphs, and also show differences from small-world graphs.
format Preprint
id arxiv_https___arxiv_org_abs_2508_10058
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle A Structural Analysis of Population Graphs
Ayers, Kimberly
Kooiker, Maxwell
Quantitative Methods
05C90
The format of graphing algorithms for genomic data has been a debate in recent biotechnology. In this paper, we discuss the construction of population graphs using said genomic data. We first examine the GENPOFAD distance measurement, developed by Joly et. al., and prove that this constitutes a metric function. We develop an algorithm to construct graphs to visualize the relationships between individuals in a population. We then provide a statistical analysis of these simulated population graphs, and show that they are distinct from randomly generated graphs, and also show differences from small-world graphs.
title A Structural Analysis of Population Graphs
topic Quantitative Methods
05C90
url https://arxiv.org/abs/2508.10058