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Main Authors: Ivanova, Nina M., Kashin, Alexey S., Ananikov, Valentine P.
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2508.18217
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author Ivanova, Nina M.
Kashin, Alexey S.
Ananikov, Valentine P.
author_facet Ivanova, Nina M.
Kashin, Alexey S.
Ananikov, Valentine P.
contents The goal of this study is to estimate the amount of lost data in electron microscopy and to analyze the extent to which experimentally acquired images are utilized in peer-reviewed scientific publications. Analysis of the number of images taken on electron microscopes at a core user facility and the number of images subsequently included in peer-reviewed scientific journals revealed low efficiency of data utilization. Up to around 90% of electron microscopy data generated during routine instrument operation remain unused. Of the more than 150 000 electron microscopy images evaluated in this study, only approximately 3 500 (just over 2%) were made available in publications. For the analyzed dataset, the amount of lost data in electron microscopy can be estimated as >90% (in terms of data being recorded but not being published in peer-reviewed literature). On the one hand, these results highlight a shortcoming in the optimal use of microscopy images; on the other hand, they indicate the existence of a large pool of electron microscopy data that can facilitate research in data science and the development of AI-based projects. The considerations important to unlock the potential of lost data are discussed in the present article.
format Preprint
id arxiv_https___arxiv_org_abs_2508_18217
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Lost Data in Electron Microscopy
Ivanova, Nina M.
Kashin, Alexey S.
Ananikov, Valentine P.
Databases
Materials Science
Digital Libraries
Chemical Physics
Data Analysis, Statistics and Probability
The goal of this study is to estimate the amount of lost data in electron microscopy and to analyze the extent to which experimentally acquired images are utilized in peer-reviewed scientific publications. Analysis of the number of images taken on electron microscopes at a core user facility and the number of images subsequently included in peer-reviewed scientific journals revealed low efficiency of data utilization. Up to around 90% of electron microscopy data generated during routine instrument operation remain unused. Of the more than 150 000 electron microscopy images evaluated in this study, only approximately 3 500 (just over 2%) were made available in publications. For the analyzed dataset, the amount of lost data in electron microscopy can be estimated as >90% (in terms of data being recorded but not being published in peer-reviewed literature). On the one hand, these results highlight a shortcoming in the optimal use of microscopy images; on the other hand, they indicate the existence of a large pool of electron microscopy data that can facilitate research in data science and the development of AI-based projects. The considerations important to unlock the potential of lost data are discussed in the present article.
title Lost Data in Electron Microscopy
topic Databases
Materials Science
Digital Libraries
Chemical Physics
Data Analysis, Statistics and Probability
url https://arxiv.org/abs/2508.18217