DiskJoin: Large-scale Vector Similarity Join with SSD
Fuente:
arXiv
Saved in:
| Main Authors: | , , , |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1866917002569842688 |
|---|---|
| author | Chen, Yanqi Yan, Xiao Meliou, Alexandra Lo, Eric |
| author_facet | Chen, Yanqi Yan, Xiao Meliou, Alexandra Lo, Eric |
| contents | Similarity join--a widely used operation in data science--finds all pairs of items that have distance smaller than a threshold. Prior work has explored distributed computation methods to scale similarity join to large data volumes but these methods require a cluster deployment, and efficiency suffers from expensive inter-machine communication. On the other hand, disk-based solutions are more cost-effective by using a single machine and storing the large dataset on high-performance external storage, such as NVMe SSDs, but in these methods the disk I/O time is a serious bottleneck. In this paper, we propose DiskJoin, the first disk-based similarity join algorithm that can process billion-scale vector datasets efficiently on a single machine. DiskJoin improves disk I/O by tailoring the data access patterns to avoid repetitive accesses and read amplification. It also uses main memory as a dynamic cache and carefully manages cache eviction to improve cache hit rate and reduce disk retrieval time. For further acceleration, we adopt a probabilistic pruning technique that can effectively prune a large number of vector pairs from computation. Our evaluation on real-world, large-scale datasets shows that DiskJoin significantly outperforms alternatives, achieving speedups from 50x to 1000x. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2508_18494 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | DiskJoin: Large-scale Vector Similarity Join with SSD Chen, Yanqi Yan, Xiao Meliou, Alexandra Lo, Eric Databases Similarity join--a widely used operation in data science--finds all pairs of items that have distance smaller than a threshold. Prior work has explored distributed computation methods to scale similarity join to large data volumes but these methods require a cluster deployment, and efficiency suffers from expensive inter-machine communication. On the other hand, disk-based solutions are more cost-effective by using a single machine and storing the large dataset on high-performance external storage, such as NVMe SSDs, but in these methods the disk I/O time is a serious bottleneck. In this paper, we propose DiskJoin, the first disk-based similarity join algorithm that can process billion-scale vector datasets efficiently on a single machine. DiskJoin improves disk I/O by tailoring the data access patterns to avoid repetitive accesses and read amplification. It also uses main memory as a dynamic cache and carefully manages cache eviction to improve cache hit rate and reduce disk retrieval time. For further acceleration, we adopt a probabilistic pruning technique that can effectively prune a large number of vector pairs from computation. Our evaluation on real-world, large-scale datasets shows that DiskJoin significantly outperforms alternatives, achieving speedups from 50x to 1000x. |
| title | DiskJoin: Large-scale Vector Similarity Join with SSD |
| topic | Databases |
| url | https://arxiv.org/abs/2508.18494 |