Estimation of Phylogenetic Tree using Gene Sequencing Data
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arXiv
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| Format: | Preprint |
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2025
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| _version_ | 1866916928252018688 |
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| author | Rafiuddin, S M |
| author_facet | Rafiuddin, S M |
| contents | A phylogenetic tree is an important way in Bioinformatics to find the evolutionary relationship among biological species. In this research, a proposed model is described for the estimation of a phylogenetic tree for a given set of data. To estimate a phylogenetic tree there are certain necessary steps have to be considered. Gene sequences are useful data resources to estimate the relationship among species at the molecular level. In this research, the approach is to create a fusion between the existing models for the estimation of phylogenetic trees and a population-based meta-heuristics approach, i.e., Genetic Algorithm. NCBI's Entrez databases are used for the acquisition of gene sequencing data. A modular parallel approach is applied to handle this dataset efficiently. This paper illustrates a proposed model to create an independent platform for phylogenetic tree estimation. Existing benchmark approaches for tree population that are used for population-based meta-heuristic search techniques to find the best possible phylogenetic tree estimation for a given set of gene sequence data. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2509_01407 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | Estimation of Phylogenetic Tree using Gene Sequencing Data Rafiuddin, S M Populations and Evolution A phylogenetic tree is an important way in Bioinformatics to find the evolutionary relationship among biological species. In this research, a proposed model is described for the estimation of a phylogenetic tree for a given set of data. To estimate a phylogenetic tree there are certain necessary steps have to be considered. Gene sequences are useful data resources to estimate the relationship among species at the molecular level. In this research, the approach is to create a fusion between the existing models for the estimation of phylogenetic trees and a population-based meta-heuristics approach, i.e., Genetic Algorithm. NCBI's Entrez databases are used for the acquisition of gene sequencing data. A modular parallel approach is applied to handle this dataset efficiently. This paper illustrates a proposed model to create an independent platform for phylogenetic tree estimation. Existing benchmark approaches for tree population that are used for population-based meta-heuristic search techniques to find the best possible phylogenetic tree estimation for a given set of gene sequence data. |
| title | Estimation of Phylogenetic Tree using Gene Sequencing Data |
| topic | Populations and Evolution |
| url | https://arxiv.org/abs/2509.01407 |