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Main Authors: Murcia, Victor, Alqahtani, Obaid, Heilman, Harlan, Collins, Brian A.
Format: Preprint
Published: 2025
Subjects:
Online Access:https://arxiv.org/abs/2509.01734
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author Murcia, Victor
Alqahtani, Obaid
Heilman, Harlan
Collins, Brian A.
author_facet Murcia, Victor
Alqahtani, Obaid
Heilman, Harlan
Collins, Brian A.
contents X-ray scattering at the carbon absorption edge is uniquely sensitive to local molecular bond identity and orientation in organic nanostructures, encoded as a function of photon energy and polarization. However, quantitative analysis is precluded due to the lack of accurate optical models with bond and orientation specificity. We generate such a model through an algorithm that parameterizes and refines density functional theory calculations with angle-resolved absorbance spectroscopy measurements. The resulting optical tensor is shown to reproduce data from samples with domains of different orientation and crystalline packing, enabling label-free orientation analyses of individual chemical moieties within molecular nanostructures using resonant X-rays.
format Preprint
id arxiv_https___arxiv_org_abs_2509_01734
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Quantitative and bond-traceable resonant X-ray optical tensors of organic molecules
Murcia, Victor
Alqahtani, Obaid
Heilman, Harlan
Collins, Brian A.
Materials Science
Soft Condensed Matter
Applied Physics
Optics
X-ray scattering at the carbon absorption edge is uniquely sensitive to local molecular bond identity and orientation in organic nanostructures, encoded as a function of photon energy and polarization. However, quantitative analysis is precluded due to the lack of accurate optical models with bond and orientation specificity. We generate such a model through an algorithm that parameterizes and refines density functional theory calculations with angle-resolved absorbance spectroscopy measurements. The resulting optical tensor is shown to reproduce data from samples with domains of different orientation and crystalline packing, enabling label-free orientation analyses of individual chemical moieties within molecular nanostructures using resonant X-rays.
title Quantitative and bond-traceable resonant X-ray optical tensors of organic molecules
topic Materials Science
Soft Condensed Matter
Applied Physics
Optics
url https://arxiv.org/abs/2509.01734