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Bibliographic Details
Main Authors: Coda, Elizabeth, Arias-Castro, Ery, Mishne, Gal
Format: Preprint
Published: 2025
Subjects:
Online Access:https://arxiv.org/abs/2509.03373
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Table of Contents:
  • Dimensionality reduction methods such as t-SNE and UMAP are popular methods for visualizing data with a potential (latent) clustered structure. They are known to group data points at the same time as they embed them, resulting in visualizations with well-separated clusters that preserve local information well. However, t-SNE and UMAP also tend to distort the global geometry of the underlying data. We propose a more transparent, modular approach consisting of first clustering the data, then embedding each cluster, and finally aligning the clusters to obtain a global embedding. We demonstrate this approach on several synthetic and real-world datasets and show that it is competitive with existing methods, while being much more transparent.