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Main Author: Ramalingam, Madhushan
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2509.10048
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author Ramalingam, Madhushan
author_facet Ramalingam, Madhushan
contents Predictive models are being increasingly used across a wide range of domains, including safety-critical applications such as medical diagnosis and criminal justice. Reliable uncertainty estimation is a crucial task in such settings. Tabular Prior-data Fitted Network (TabPFN) is a recently proposed machine learning foundation model for tabular dataset, which uses a generative transformer architecture. Variational Bayesian Last Layers (VBLL) is a state-of-the-art lightweight variational formulation that effectively improves uncertainty estimation with minimal computational overhead. In this work we aim to evaluate the performance of VBLL integrated with the recently proposed TabPFN in uncertainty calibration. Our experiments, conducted on three benchmark medical tabular datasets, compare the performance of the original TabPFN and the VBLL-integrated version. Contrary to expectations, we observed that original TabPFN consistently outperforms VBLL integrated TabPFN in uncertainty calibration across all datasets.
format Preprint
id arxiv_https___arxiv_org_abs_2509_10048
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Uncertainty-Aware Tabular Prediction: Evaluating VBLL-Enhanced TabPFN in Safety-Critical Medical Data
Ramalingam, Madhushan
Machine Learning
Predictive models are being increasingly used across a wide range of domains, including safety-critical applications such as medical diagnosis and criminal justice. Reliable uncertainty estimation is a crucial task in such settings. Tabular Prior-data Fitted Network (TabPFN) is a recently proposed machine learning foundation model for tabular dataset, which uses a generative transformer architecture. Variational Bayesian Last Layers (VBLL) is a state-of-the-art lightweight variational formulation that effectively improves uncertainty estimation with minimal computational overhead. In this work we aim to evaluate the performance of VBLL integrated with the recently proposed TabPFN in uncertainty calibration. Our experiments, conducted on three benchmark medical tabular datasets, compare the performance of the original TabPFN and the VBLL-integrated version. Contrary to expectations, we observed that original TabPFN consistently outperforms VBLL integrated TabPFN in uncertainty calibration across all datasets.
title Uncertainty-Aware Tabular Prediction: Evaluating VBLL-Enhanced TabPFN in Safety-Critical Medical Data
topic Machine Learning
url https://arxiv.org/abs/2509.10048