Saved in:
| Main Authors: | Le, Nam H., Erickson, Patrick, Zhang, Yanbo, Levin, Michael, Bongard, Josh |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | https://arxiv.org/abs/2509.10660 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Building multiscale models with PhysiBoSS, an agent-based modeling tool
by: Ruscone, Marco, et al.
Published: (2024)
by: Ruscone, Marco, et al.
Published: (2024)
Giving Simulated Cells a Voice: Evolving Prompt-to-Intervention Models for Cellular Control
by: Le, Nam H., et al.
Published: (2025)
by: Le, Nam H., et al.
Published: (2025)
FlowClass.jl: Classifying Dynamical Systems by Structural Properties in Julia
by: Stumpf, Michael P. H.
Published: (2025)
by: Stumpf, Michael P. H.
Published: (2025)
The Power Stroke Mechanism of Muscle Contraction at the Confluence of Biology and Physics
by: Baker, Josh
Published: (2024)
by: Baker, Josh
Published: (2024)
Agent-Based Modelling in Cellular Biology - Are we flexible yet?
by: Pleyer, Jonas
Published: (2025)
by: Pleyer, Jonas
Published: (2025)
Combination Therapy for Chronic Hepatitis B Using Capsid Recycling Inhibitor
by: Sutradhar, Rupchand, et al.
Published: (2024)
by: Sutradhar, Rupchand, et al.
Published: (2024)
Matters of Life and Death in Computational Cell Biology
by: McShaffrey, Connor, et al.
Published: (2025)
by: McShaffrey, Connor, et al.
Published: (2025)
Parameter Identifiability Under Limited Experimental Data in Age-Structured Models of the Cell Cycle
by: Nixson, Ruby E., et al.
Published: (2026)
by: Nixson, Ruby E., et al.
Published: (2026)
Topological constraints on self-organisation in locally interacting systems
by: Sacco, Francesco, et al.
Published: (2025)
by: Sacco, Francesco, et al.
Published: (2025)
Inference of weak-form partial differential equations describing migration and proliferation mechanisms in wound healing experiments on cancer cells
by: Kinnunen, Patrick C., et al.
Published: (2023)
by: Kinnunen, Patrick C., et al.
Published: (2023)
Cellular dynamics of host-parasitoid interactions: Insights from the encapsulation process in a partially resistant host
by: Gornard, Samuel, et al.
Published: (2024)
by: Gornard, Samuel, et al.
Published: (2024)
SynthPert: Enhancing LLM Biological Reasoning via Synthetic Reasoning Traces for Cellular Perturbation Prediction
by: Phillips, Lawrence, et al.
Published: (2025)
by: Phillips, Lawrence, et al.
Published: (2025)
Mechanics, Energetics, Entropy and Kinetics of a Binary Mechanical Model System
by: Baker, Josh E.
Published: (2022)
by: Baker, Josh E.
Published: (2022)
Chemical Relaxation of a Binary Mechanical Model System
by: Baker, Josh E.
Published: (2022)
by: Baker, Josh E.
Published: (2022)
VCWorld: A Biological World Model for Virtual Cell Simulation
by: Wei, Zhijian, et al.
Published: (2025)
by: Wei, Zhijian, et al.
Published: (2025)
OmicsLM: A Multimodal Large Language Model for Multi-Sample Omics Reasoning
by: Sypetkowski, Maciej, et al.
Published: (2026)
by: Sypetkowski, Maciej, et al.
Published: (2026)
AI-driven control of bioelectric signalling for real-time topological reorganization of cells
by: de Carvalho, Gonçalo Hora
Published: (2025)
by: de Carvalho, Gonçalo Hora
Published: (2025)
Bioelectrical Interfaces Beyond Cellular Excitability: Cancer, Aging, and Gene Expression Reprogramming
by: Cadinu, Paolo, et al.
Published: (2025)
by: Cadinu, Paolo, et al.
Published: (2025)
Modal Analysis of Cellular Dynamics in the Morphospace in Epithelial-Mesenchymal Transition
by: Das, Akash Chandra, et al.
Published: (2024)
by: Das, Akash Chandra, et al.
Published: (2024)
Dynamical strategies for obstacle avoidance during Dictyostelium discoideum aggregation: a Multi-agent system model
by: Proverbio, Daniele, et al.
Published: (2019)
by: Proverbio, Daniele, et al.
Published: (2019)
Properties of Hagen-Poiseuille flow in channel networks
by: Valente, A. F., et al.
Published: (2024)
by: Valente, A. F., et al.
Published: (2024)
Logic-dependent emergence of multistability, hysteresis, and biphasic dynamics in a minimal positive feedback network with an autoloop
by: Srivastava, Akriti, et al.
Published: (2024)
by: Srivastava, Akriti, et al.
Published: (2024)
Optimality theory of stigmergic collective information processing by chemotactic cells
by: Kato, Masaki, et al.
Published: (2024)
by: Kato, Masaki, et al.
Published: (2024)
Pitchfork Bifurcation In A Coupled Cell System
by: Raj, Shikhar, et al.
Published: (2024)
by: Raj, Shikhar, et al.
Published: (2024)
Optimisation of neoadjuvant pembrolizumab therapy for locally advanced MSI-H/dMMR colorectal cancer using data-driven delay integro-differential equations
by: Hawi, Georgio, et al.
Published: (2024)
by: Hawi, Georgio, et al.
Published: (2024)
Hydrodynamic interactions mask the true heterogeneity of a microscopic collective
by: Nair, Balagopal, et al.
Published: (2026)
by: Nair, Balagopal, et al.
Published: (2026)
Modelling Population-Level Hes1 Dynamics: Insights from a Multi-Framework Approach
by: Menz, Gesina, et al.
Published: (2024)
by: Menz, Gesina, et al.
Published: (2024)
A kinetic derivation of spatial distributed models for tumor-immune system interactions
by: Conte, Martina, et al.
Published: (2024)
by: Conte, Martina, et al.
Published: (2024)
Cell-cell adhesion cannot sustain extended follower streams in a minimal non-local model of leader-follower migration
by: Jewell, Thomas Jun, et al.
Published: (2026)
by: Jewell, Thomas Jun, et al.
Published: (2026)
Towards a mathematical framework for modelling cell fate dynamics
by: Vittadello, Sean T., et al.
Published: (2024)
by: Vittadello, Sean T., et al.
Published: (2024)
Mapping, modeling, and reprogramming cell-fate decision making systems
by: Ham, Lucy, et al.
Published: (2024)
by: Ham, Lucy, et al.
Published: (2024)
Cellular gradient flow structure connects single-cell-level rules and population-level dynamics
by: Horiguchi, Shuhei A., et al.
Published: (2022)
by: Horiguchi, Shuhei A., et al.
Published: (2022)
Cellular forgetting, desensitisation, stress and aging in signalling networks. When do cells refuse to learn more?
by: Veres, Tamas, et al.
Published: (2023)
by: Veres, Tamas, et al.
Published: (2023)
Motion Ordering in Cellular Polar-polar and Polar-nonpolar Interactions
by: Matsushita, Katsuyoshi, et al.
Published: (2024)
by: Matsushita, Katsuyoshi, et al.
Published: (2024)
A mathematical model for the role of macrophage chemotactic emigration in the early atherosclerotic plaque
by: Watson, Michael G.
Published: (2026)
by: Watson, Michael G.
Published: (2026)
DiffEx: Explaining a Classifier with Diffusion Models to Identify Microscopic Cellular Variations
by: Bourou, Anis, et al.
Published: (2025)
by: Bourou, Anis, et al.
Published: (2025)
Orthotropic Viscoelastic Creep in Cellular Scaffolds
by: Ferrara, Alessia, et al.
Published: (2025)
by: Ferrara, Alessia, et al.
Published: (2025)
Ignition criteria for trigger waves in cell signaling
by: Schlomann, Brandon H., et al.
Published: (2025)
by: Schlomann, Brandon H., et al.
Published: (2025)
A mathematical model for smooth muscle cell phenotype switching in atherosclerotic plaque
by: Ndenda, Joseph P., et al.
Published: (2024)
by: Ndenda, Joseph P., et al.
Published: (2024)
A spatially resolved and lipid-structured model for macrophage populations in early human atherosclerotic lesions
by: Chambers, Keith L., et al.
Published: (2025)
by: Chambers, Keith L., et al.
Published: (2025)
Similar Items
-
Building multiscale models with PhysiBoSS, an agent-based modeling tool
by: Ruscone, Marco, et al.
Published: (2024) -
Giving Simulated Cells a Voice: Evolving Prompt-to-Intervention Models for Cellular Control
by: Le, Nam H., et al.
Published: (2025) -
FlowClass.jl: Classifying Dynamical Systems by Structural Properties in Julia
by: Stumpf, Michael P. H.
Published: (2025) -
The Power Stroke Mechanism of Muscle Contraction at the Confluence of Biology and Physics
by: Baker, Josh
Published: (2024) -
Agent-Based Modelling in Cellular Biology - Are we flexible yet?
by: Pleyer, Jonas
Published: (2025)