Multimodal Regression for Enzyme Turnover Rates Prediction
Fuente:
arXiv
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| Main Authors: | Hu, Bozhen, Tan, Cheng, Li, Siyuan, Zheng, Jiangbin, Qiu, Sizhe, Xia, Jun, Li, Stan Z. |
|---|---|
| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | |
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