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Main Authors: Yeung, Pak-Hei, Ramesh, Jayroop, Lyu, Pengfei, Namburete, Ana, Rajapakse, Jagath
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2509.15167
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author Yeung, Pak-Hei
Ramesh, Jayroop
Lyu, Pengfei
Namburete, Ana
Rajapakse, Jagath
author_facet Yeung, Pak-Hei
Ramesh, Jayroop
Lyu, Pengfei
Namburete, Ana
Rajapakse, Jagath
contents This paper explores the transfer of knowledge from general vision models pretrained on 2D natural images to improve 3D medical image segmentation. We focus on the semi-supervised setting, where only a few labeled 3D medical images are available, along with a large set of unlabeled images. To tackle this, we propose a model-agnostic framework that progressively distills knowledge from a 2D pretrained model to a 3D segmentation model trained from scratch. Our approach, M&N, involves iterative co-training of the two models using pseudo-masks generated by each other, along with our proposed learning rate guided sampling that adaptively adjusts the proportion of labeled and unlabeled data in each training batch to align with the models' prediction accuracy and stability, minimizing the adverse effect caused by inaccurate pseudo-masks. Extensive experiments on multiple publicly available datasets demonstrate that M&N achieves state-of-the-art performance, outperforming thirteen existing semi-supervised segmentation approaches under all different settings. Importantly, ablation studies show that M&N remains model-agnostic, allowing seamless integration with different architectures. This ensures its adaptability as more advanced models emerge. The code is available at https://github.com/pakheiyeung/M-N.
format Preprint
id arxiv_https___arxiv_org_abs_2509_15167
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Semi-Supervised 3D Medical Segmentation from 2D Natural Images Pretrained Model
Yeung, Pak-Hei
Ramesh, Jayroop
Lyu, Pengfei
Namburete, Ana
Rajapakse, Jagath
Computer Vision and Pattern Recognition
Artificial Intelligence
Machine Learning
This paper explores the transfer of knowledge from general vision models pretrained on 2D natural images to improve 3D medical image segmentation. We focus on the semi-supervised setting, where only a few labeled 3D medical images are available, along with a large set of unlabeled images. To tackle this, we propose a model-agnostic framework that progressively distills knowledge from a 2D pretrained model to a 3D segmentation model trained from scratch. Our approach, M&N, involves iterative co-training of the two models using pseudo-masks generated by each other, along with our proposed learning rate guided sampling that adaptively adjusts the proportion of labeled and unlabeled data in each training batch to align with the models' prediction accuracy and stability, minimizing the adverse effect caused by inaccurate pseudo-masks. Extensive experiments on multiple publicly available datasets demonstrate that M&N achieves state-of-the-art performance, outperforming thirteen existing semi-supervised segmentation approaches under all different settings. Importantly, ablation studies show that M&N remains model-agnostic, allowing seamless integration with different architectures. This ensures its adaptability as more advanced models emerge. The code is available at https://github.com/pakheiyeung/M-N.
title Semi-Supervised 3D Medical Segmentation from 2D Natural Images Pretrained Model
topic Computer Vision and Pattern Recognition
Artificial Intelligence
Machine Learning
url https://arxiv.org/abs/2509.15167