Learning from Gene Names, Expression Values and Images: Contrastive Masked Text-Image Pretraining for Spatial Transcriptomics Representation Learning
Fuente:
arXiv
Guardado en:
| Autores principales: | Qian, Jiahe, Fang, Yaoyu, Weng, Ziqiao, Wang, Xinkun, Cooper, Lee A., Zhou, Bo |
|---|---|
| Formato: | Preprint |
| Publicado: |
2025
|
| Materias: | |
| Acceso en línea: | |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
Central-to-Local Adaptive Generative Diffusion Framework for Improving Gene Expression Prediction in Data-Limited Spatial Transcriptomics
por: Fang, Yaoyu, et al.
Publicado: (2026)
por: Fang, Yaoyu, et al.
Publicado: (2026)
Sparser2Sparse: Single-shot Sparser-to-Sparse Learning for Spatial Transcriptomics Imputation with Natural Image Co-learning
por: Fang, Yaoyu, et al.
Publicado: (2025)
por: Fang, Yaoyu, et al.
Publicado: (2025)
HiFusion: Hierarchical Intra-Spot Alignment and Regional Context Fusion for Spatial Gene Expression Prediction from Histopathology
por: Weng, Ziqiao, et al.
Publicado: (2025)
por: Weng, Ziqiao, et al.
Publicado: (2025)
ST-DAI: Single-shot 2.5D Spatial Transcriptomics with Intra-Sample Domain Adaptive Imputation for Cost-efficient 3D Reconstruction
por: Qian, Jiahe, et al.
Publicado: (2025)
por: Qian, Jiahe, et al.
Publicado: (2025)
DELST: Dual Entailment Learning for Hyperbolic Image-Gene Pretraining in Spatial Transcriptomics
por: Chen, Xulin, et al.
Publicado: (2025)
por: Chen, Xulin, et al.
Publicado: (2025)
Learning Relative Gene Expression Trends from Pathology Images in Spatial Transcriptomics
por: Nishimura, Kazuya, et al.
Publicado: (2025)
por: Nishimura, Kazuya, et al.
Publicado: (2025)
AMA-SAM: Adversarial Multi-Domain Alignment of Segment Anything Model for High-Fidelity Histology Nuclei Segmentation
por: Qian, Jiahe, et al.
Publicado: (2025)
por: Qian, Jiahe, et al.
Publicado: (2025)
Spatial Transcriptomics Expression Prediction from Histopathology Based on Cross-Modal Mask Reconstruction and Contrastive Learning
por: Liu, Junzhuo, et al.
Publicado: (2025)
por: Liu, Junzhuo, et al.
Publicado: (2025)
Spatial Transcriptomics as Images for Large-Scale Pretraining
por: Zhu, Yishun, et al.
Publicado: (2026)
por: Zhu, Yishun, et al.
Publicado: (2026)
Learning Generalized Medical Image Representations through Image-Graph Contrastive Pretraining
por: Khanna, Sameer, et al.
Publicado: (2024)
por: Khanna, Sameer, et al.
Publicado: (2024)
Relational Contrastive Learning and Masked Image Modeling for Scene Text Recognition
por: Lin, Tiancheng, et al.
Publicado: (2024)
por: Lin, Tiancheng, et al.
Publicado: (2024)
SpaRED benchmark: Enhancing Gene Expression Prediction from Histology Images with Spatial Transcriptomics Completion
por: Mejia, Gabriel, et al.
Publicado: (2024)
por: Mejia, Gabriel, et al.
Publicado: (2024)
TIPS: Text-Image Pretraining with Spatial awareness
por: Maninis, Kevis-Kokitsi, et al.
Publicado: (2024)
por: Maninis, Kevis-Kokitsi, et al.
Publicado: (2024)
Spatially Gene Expression Prediction using Dual-Scale Contrastive Learning
por: Qu, Mingcheng, et al.
Publicado: (2025)
por: Qu, Mingcheng, et al.
Publicado: (2025)
Cross-Slice Knowledge Transfer via Masked Multi-Modal Heterogeneous Graph Contrastive Learning for Spatial Gene Expression Inference
por: Shi, Zhiceng, et al.
Publicado: (2026)
por: Shi, Zhiceng, et al.
Publicado: (2026)
Completing Spatial Transcriptomics Data for Gene Expression Prediction Benchmarking
por: Ruiz, Daniela, et al.
Publicado: (2025)
por: Ruiz, Daniela, et al.
Publicado: (2025)
Spatial Transcriptomics Analysis of Zero-shot Gene Expression Prediction
por: Yang, Yan, et al.
Publicado: (2024)
por: Yang, Yan, et al.
Publicado: (2024)
Text-to-Image GAN with Pretrained Representations
por: You, Xiaozhou, et al.
Publicado: (2024)
por: You, Xiaozhou, et al.
Publicado: (2024)
Global Context-aware Representation Learning for Spatially Resolved Transcriptomics
por: Oh, Yunhak, et al.
Publicado: (2025)
por: Oh, Yunhak, et al.
Publicado: (2025)
Towards Unified Molecule-Enhanced Pathology Image Representation Learning via Integrating Spatial Transcriptomics
por: Han, Minghao, et al.
Publicado: (2024)
por: Han, Minghao, et al.
Publicado: (2024)
Reinforcement Learning Meets Masked Generative Models: Mask-GRPO for Text-to-Image Generation
por: Luo, Yifu, et al.
Publicado: (2025)
por: Luo, Yifu, et al.
Publicado: (2025)
Contrastive Learning for Image Complexity Representation
por: Liu, Shipeng, et al.
Publicado: (2024)
por: Liu, Shipeng, et al.
Publicado: (2024)
A Large-Scale Benchmark of Cross-Modal Learning for Histology and Gene Expression in Spatial Transcriptomics
por: Gindra, Rushin H., et al.
Publicado: (2025)
por: Gindra, Rushin H., et al.
Publicado: (2025)
Learning Topology-Aware Implicit Field for Unified Pulmonary Tree Modeling with Incomplete Topological Supervision
por: Weng, Ziqiao, et al.
Publicado: (2026)
por: Weng, Ziqiao, et al.
Publicado: (2026)
ViC-MAE: Self-Supervised Representation Learning from Images and Video with Contrastive Masked Autoencoders
por: Hernandez, Jefferson, et al.
Publicado: (2023)
por: Hernandez, Jefferson, et al.
Publicado: (2023)
HEXST: Hexagonal Shifted-Window Transformer for Spatial Transcriptomics Gene Expression Prediction
por: Byeon, Keunho, et al.
Publicado: (2026)
por: Byeon, Keunho, et al.
Publicado: (2026)
ST-Align: A Multimodal Foundation Model for Image-Gene Alignment in Spatial Transcriptomics
por: Lin, Yuxiang, et al.
Publicado: (2024)
por: Lin, Yuxiang, et al.
Publicado: (2024)
Learning 3D Representations for Spatial Intelligence from Unposed Multi-View Images
por: Zhou, Bo, et al.
Publicado: (2026)
por: Zhou, Bo, et al.
Publicado: (2026)
FedSKD: Aggregation-free Model-heterogeneous Federated Learning via Multi-dimensional Similarity Knowledge Distillation for Medical Image Classification
por: Weng, Ziqiao, et al.
Publicado: (2025)
por: Weng, Ziqiao, et al.
Publicado: (2025)
Attention-Guided Masked Autoencoders For Learning Image Representations
por: Sick, Leon, et al.
Publicado: (2024)
por: Sick, Leon, et al.
Publicado: (2024)
Multiple Instance Learning Framework with Masked Hard Instance Mining for Gigapixel Histopathology Image Analysis
por: Tang, Wenhao, et al.
Publicado: (2025)
por: Tang, Wenhao, et al.
Publicado: (2025)
UNCAGE: Contrastive Attention Guidance for Masked Generative Transformers in Text-to-Image Generation
por: Kang, Wonjun, et al.
Publicado: (2025)
por: Kang, Wonjun, et al.
Publicado: (2025)
Auxiliary Gene Learning: Spatial Gene Expression Estimation by Auxiliary Gene Selection
por: Shiku, Kaito, et al.
Publicado: (2025)
por: Shiku, Kaito, et al.
Publicado: (2025)
Efficient 4D fMRI ASD Classification using Spatial-Temporal-Omics-based Learning Framework
por: Weng, Ziqiao, et al.
Publicado: (2025)
por: Weng, Ziqiao, et al.
Publicado: (2025)
MLIP: Medical Language-Image Pre-training with Masked Local Representation Learning
por: Liu, Jiarun, et al.
Publicado: (2024)
por: Liu, Jiarun, et al.
Publicado: (2024)
Learning Spatially Decoupled Color Representations for Facial Image Colorization
por: Zhu, Hangyan, et al.
Publicado: (2024)
por: Zhu, Hangyan, et al.
Publicado: (2024)
NamedCurves: Learned Image Enhancement via Color Naming
por: Serrano-Lozano, David, et al.
Publicado: (2024)
por: Serrano-Lozano, David, et al.
Publicado: (2024)
MIMIC: Mask Image Pre-training with Mix Contrastive Fine-tuning for Facial Expression Recognition
por: Zhang, Fan, et al.
Publicado: (2024)
por: Zhang, Fan, et al.
Publicado: (2024)
Learning Contrastive Feature Representations for Facial Action Unit Detection
por: Shang, Ziqiao, et al.
Publicado: (2024)
por: Shang, Ziqiao, et al.
Publicado: (2024)
Adapting a Pre-trained Single-Cell Foundation Model to Spatial Gene Expression Generation from Histology Images
por: Fang, Donghai, et al.
Publicado: (2026)
por: Fang, Donghai, et al.
Publicado: (2026)
Ejemplares similares
-
Central-to-Local Adaptive Generative Diffusion Framework for Improving Gene Expression Prediction in Data-Limited Spatial Transcriptomics
por: Fang, Yaoyu, et al.
Publicado: (2026) -
Sparser2Sparse: Single-shot Sparser-to-Sparse Learning for Spatial Transcriptomics Imputation with Natural Image Co-learning
por: Fang, Yaoyu, et al.
Publicado: (2025) -
HiFusion: Hierarchical Intra-Spot Alignment and Regional Context Fusion for Spatial Gene Expression Prediction from Histopathology
por: Weng, Ziqiao, et al.
Publicado: (2025) -
ST-DAI: Single-shot 2.5D Spatial Transcriptomics with Intra-Sample Domain Adaptive Imputation for Cost-efficient 3D Reconstruction
por: Qian, Jiahe, et al.
Publicado: (2025) -
DELST: Dual Entailment Learning for Hyperbolic Image-Gene Pretraining in Spatial Transcriptomics
por: Chen, Xulin, et al.
Publicado: (2025)