Cover Image

13CFLUX -- Third-generation high-performance engine for isotopically (non)stationary 13C metabolic flux analysis

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Stratmann, Anton, Beyß, Martin, Jadebeck, Johann F., Wiechert, Wolfgang, Nöh, Katharina
Format:	Preprint
Published:	2025
Subjects:	Quantitative Methods
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Trans-dimensional Bayesian model averaging for $^{13}$C-based metabolic flux analysis: Evidence-based flux inference under structural model uncertainty
by: Jadebeck, Johann F., et al.
Published: (2026)

Automated multi-dataset INST $^{13}$C metabolic flux analysis at microliter scale reveals robust fluxes but variable metabolite pools in $Corynebacterium~glutamicum$
by: Nießer, Jochen, et al.
Published: (2026)

Higher-Order Hit-&-Run Samplers for Linearly Constrained Densities
by: Paul, Richard D., et al.
Published: (2026)

Robust Approximate Characterization of Single-Cell Heterogeneity in Microbial Growth
by: Paul, Richard D., et al.
Published: (2024)

PyUAT: Open-source Python framework for efficient and scalable cell tracking
by: Seiffarth, Johannes, et al.
Published: (2025)

Geometric deep learning assists protein engineering. Opportunities and Challenges
by: García-Vinuesa, Julián, et al.
Published: (2025)

A whole-body mathematical model of cholesterol metabolism and transport
by: Carstensen, Peter Emil, et al.
Published: (2024)

FBApro: A fast, simple linear transformation for diverse metabolic modeling tasks
by: Bruner, Ariel, et al.
Published: (2026)

Modeling principles for a physiology-based whole-body model of human metabolism
by: Blicher, Laura Hjort, et al.
Published: (2024)

IgCraft: A versatile sequence generation framework for antibody discovery and engineering
by: Greenig, Matthew, et al.
Published: (2025)

Modelling the role of flux density and coating on nanoparticle internalization by tumor cells under centrifugation
by: Calvo, Gabriel F., et al.
Published: (2024)

Bridging the genotype-phenotype gap with generative artificial intelligence
by: Liu, Yangfan, et al.
Published: (2025)

Hierarchical protein backbone generation with latent and structure diffusion
by: Yim, Jason, et al.
Published: (2025)

Molecular techniques employed in CTG(Ser1) and CTG(Ala) D-xylose metabolizing yeast clades for strain design and industrial applications
by: Wives, Ana Paula, et al.
Published: (2024)

ProtBoost: protein function prediction with Py-Boost and Graph Neural Networks -- CAFA5 top2 solution
by: Chervov, Alexander, et al.
Published: (2024)

easyplater: The easy way to generate microplate designs deconvolved from multivariate clinical data
by: Taylor, Avigail, et al.
Published: (2025)

Association of normalization, non-differentially expressed genes and data source with machine learning performance in intra-dataset or cross-dataset modelling of transcriptomic and clinical data
by: Deng, Fei, et al.
Published: (2025)

Izzy: a high-throughput metagenomic read simulator
by: Lavon, Amit
Published: (2025)

Diceplot: A package for high dimensional categorical data visualization
by: Flotho, Matthias, et al.
Published: (2024)

A technical review of multi-omics data integration methods: from classical statistical to deep generative approaches
by: Baião, Ana R., et al.
Published: (2025)

Synthesizing study-specific controls using generative models on open access datasets for harmonized multi-study analyses
by: Gadewar, Shruti P., et al.
Published: (2024)

From thermodynamics to protein design: Diffusion models for biomolecule generation towards autonomous protein engineering
by: Li, Wen-ran, et al.
Published: (2025)

Random feature baselines provide distributional performance and feature selection benchmarks for clinical and 'omic machine learning
by: Ellis, Randall J., et al.
Published: (2024)

Group lasso based selection for high-dimensional mediation analysis
by: Jérolon, Allan, et al.
Published: (2024)

FRAP analysis Measuring biophysical kinetic parameters using image analysis
by: Hiremath, Sharva V., et al.
Published: (2024)

Validation of Golden Gate assemblies using highly multiplexed Nanopore amplicon sequencing
by: Rojas, Adan A. Ramirez, et al.
Published: (2024)

Characterizing the non-monotonic behavior of mutual information along biochemical reaction cascades
by: Fan, Raymond, et al.
Published: (2023)

Prediction of source nutrients for microorganisms using metabolic networks
by: Bulka, Olivia, et al.
Published: (2026)

HyperEvoGen: Exploring deep phylogeny using non-Euclidean variational inference
by: Lamanna, Jason, et al.
Published: (2026)

Novel software for continuous wavelet analysis enable EEG real-time analysis on portable computers
by: Nakanishi, Shoichiro
Published: (2025)

How To Make Your Cell Tracker Say "I dunno!"
by: Paul, Richard D., et al.
Published: (2025)

Practical and scalable simulations of non-Markovian stochastic processes and temporal networks with individual node properties
by: Pelissier, Aurelien, et al.
Published: (2022)

SBMLtoOdin and Menelmacar: Interactive visualisation of systems biology models for expert and non-expert audiences
by: Lorenz, Leonie J., et al.
Published: (2025)

Attribution assignment for deep-generative sequence models enables interpretability analysis using positive-only data
by: Frank, Robert, et al.
Published: (2025)

ORMIR_XCT: A Python package for high resolution peripheral quantitative computed tomography image processing
by: Kuczynski, Michael T., et al.
Published: (2023)

MP-GCAN: a highly accurate classifier for $α$-helical membrane proteins and $β$-barrel proteins
by: Li, Kunyang, et al.
Published: (2025)

Network-community analysis of cellular senescence
by: Sabalic, Alda, et al.
Published: (2024)

A compact model of Escherichia coli core and biosynthetic metabolism
by: Corrao, Marco, et al.
Published: (2024)

Enhancing Peak Assignment in 13C NMR Spectroscopy: A Novel Approach Using Multimodal Alignment
by: Xu, Hao, et al.
Published: (2023)

Noise propagation and MP-PCA image denoising for high-resolution quantitative T2* and magnetic susceptibility mapping (QSM)
by: Doniza, Liad, et al.
Published: (2024)