Response to dynamic shape changes in suspensions of hard rectangles

Fuente: arXiv
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Main Authors: Dertli, Denis, Speck, Thomas
Format: Preprint
Published: 2025
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author Dertli, Denis
Speck, Thomas
author_facet Dertli, Denis
Speck, Thomas
contents While the autonomous assembly of hard nanoparticles with different shapes has been studied extensively both in experiment and simulations, little is known about systems where particle shape can be dynamically altered. DNA origami nanostructures offer an alternative route to synthesize nanoparticles that can change their shape on demand. Motivated by recent experiments, here we study the structure and dynamics of suspensions of hard squares in response to an elongation into a rectangle. Performing extensive hard-particle Monte Carlo simulations at constant volume and employing two protocols, we numerically analyze the collective diffusion and ordering during quenching and the subsequent relaxation to the new equilibrium state. We find that the cascading protocol, which mimics experimentally realized DNA origami, can become dynamically arrested due to the increase in effective packing fraction.
format Preprint
id arxiv_https___arxiv_org_abs_2509_24885
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Response to dynamic shape changes in suspensions of hard rectangles
Dertli, Denis
Speck, Thomas
Soft Condensed Matter
While the autonomous assembly of hard nanoparticles with different shapes has been studied extensively both in experiment and simulations, little is known about systems where particle shape can be dynamically altered. DNA origami nanostructures offer an alternative route to synthesize nanoparticles that can change their shape on demand. Motivated by recent experiments, here we study the structure and dynamics of suspensions of hard squares in response to an elongation into a rectangle. Performing extensive hard-particle Monte Carlo simulations at constant volume and employing two protocols, we numerically analyze the collective diffusion and ordering during quenching and the subsequent relaxation to the new equilibrium state. We find that the cascading protocol, which mimics experimentally realized DNA origami, can become dynamically arrested due to the increase in effective packing fraction.
title Response to dynamic shape changes in suspensions of hard rectangles
topic Soft Condensed Matter
url https://arxiv.org/abs/2509.24885