TopROI: A topology-informed network approach for tissue partitioning
Fuente:
arXiv
Saved in:
| Main Authors: | Iváñez, Sergio Serrano de Haro, Moore, Joshua W., Grzesiak, Lucile, Mullholand, Eoghan J., Harrington, Heather, Leedham, Simon J., Byrne, Helen M. |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Topology of Multi-species Localization
by: Natarajan, Abhinav, et al.
Published: (2026)
by: Natarajan, Abhinav, et al.
Published: (2026)
Topological shape transform for thymus structures
by: Yang, Haochen, et al.
Published: (2026)
by: Yang, Haochen, et al.
Published: (2026)
Persistent homology classifies parameter dependence of patterns in Turing systems
by: Spector, Reemon, et al.
Published: (2024)
by: Spector, Reemon, et al.
Published: (2024)
Topology across Scales on Heterogeneous Cell Data
by: Torras-Pérez, Maria, et al.
Published: (2025)
by: Torras-Pérez, Maria, et al.
Published: (2025)
Topological model selection: a case-study in tumour-induced angiogenesis
by: McDonald, Robert A, et al.
Published: (2025)
by: McDonald, Robert A, et al.
Published: (2025)
Fast Directed $q$-Analysis for Brain Graphs
by: Windisch, Felix, et al.
Published: (2025)
by: Windisch, Felix, et al.
Published: (2025)
Topological biomarkers for real-time detection of epileptic seizures
by: Fernández, Ximena, et al.
Published: (2022)
by: Fernández, Ximena, et al.
Published: (2022)
Benchmarking AlphaFold3's protein-protein complex accuracy and machine learning prediction reliability for binding free energy changes upon mutation
by: Wee, JunJie, et al.
Published: (2024)
by: Wee, JunJie, et al.
Published: (2024)
Cross-sectional shape analysis for risk assessment and prognosis of patients with true lumen narrowing after type-A aortic dissection surgery
by: Reddy, J V Ramana, et al.
Published: (2024)
by: Reddy, J V Ramana, et al.
Published: (2024)
Novel definition and quantitative analysis of branch structure with topological data analysis
by: Oda, Haruhisa, et al.
Published: (2024)
by: Oda, Haruhisa, et al.
Published: (2024)
A distribution-guided Mapper algorithm
by: Tao, Yuyang, et al.
Published: (2024)
by: Tao, Yuyang, et al.
Published: (2024)
Persistent reachability homology in machine learning applications
by: Caputi, Luigi, et al.
Published: (2025)
by: Caputi, Luigi, et al.
Published: (2025)
Use of Topological Data Analysis for the Detection of Phenomenological Bifurcations in Stochastic Epidemiological Models
by: Tanweer, Sunia, et al.
Published: (2025)
by: Tanweer, Sunia, et al.
Published: (2025)
Persistence diagrams as morphological signatures of cells: A method to measure and compare cells within a population
by: Bleile, Yossi Bokor, et al.
Published: (2023)
by: Bleile, Yossi Bokor, et al.
Published: (2023)
Stochastic modelling reveals that chromatin folding buffers epigenetic landscapes against sirtuin depletion during DNA damage
by: Stepanova, Daria, et al.
Published: (2025)
by: Stepanova, Daria, et al.
Published: (2025)
TopSpace: spatial topic modeling for unsupervised discovery of multicellular spatial tissue structures in multiplex imaging
by: Choi, Junsouk, et al.
Published: (2025)
by: Choi, Junsouk, et al.
Published: (2025)
Attention-based ROI Discovery in 3D Tissue Images
by: Fathollahian, Hossein, et al.
Published: (2025)
by: Fathollahian, Hossein, et al.
Published: (2025)
Mathematical modeling of evolution of cell networks in epithelial tissues
by: Ivan Krasnyakov
Published: (2024)
by: Ivan Krasnyakov
Published: (2024)
Topology-enhanced machine learning model (Top-ML) for anticancer peptide prediction
by: Tan, Joshua Zhi En, et al.
Published: (2024)
by: Tan, Joshua Zhi En, et al.
Published: (2024)
Quantifying sex differences in brain network topology by aggregating nodal centrality rankings
by: Chen, Wenyu, et al.
Published: (2024)
by: Chen, Wenyu, et al.
Published: (2024)
An Asymptotic Analysis of Bivalent Monoclonal Antibody-Antigen Binding
by: Heirene, Luke A, et al.
Published: (2025)
by: Heirene, Luke A, et al.
Published: (2025)
Sweetwater: An interpretable and adaptive autoencoder for efficient tissue deconvolution
by: de la Fuente, Jesus, et al.
Published: (2023)
by: de la Fuente, Jesus, et al.
Published: (2023)
Drug-target interaction prediction by integrating heterogeneous information with mutual attention network
by: Zhang, Yuanyuan, et al.
Published: (2024)
by: Zhang, Yuanyuan, et al.
Published: (2024)
Algebraic identifiability of partial differential equation models
by: Byrne, Helen, et al.
Published: (2024)
by: Byrne, Helen, et al.
Published: (2024)
Forecasting and predicting stochastic agent-based model data with biologically-informed neural networks
by: Nardini, John T.
Published: (2023)
by: Nardini, John T.
Published: (2023)
Fibers of point cloud persistence
by: Beers, David, et al.
Published: (2024)
by: Beers, David, et al.
Published: (2024)
Exploring accuracy and uncertainty quantification in physics-informed neural networks for inferring microbial community dynamics
by: Fontanarrosa, Pedro, et al.
Published: (2025)
by: Fontanarrosa, Pedro, et al.
Published: (2025)
Identifying Therapeutic Targets for Triple-Negative Breast Cancer using a Novel Mathematical Model of the Tumor Microenvironment
by: Adams, Kyle, et al.
Published: (2026)
by: Adams, Kyle, et al.
Published: (2026)
Quantifying cell cycle regulation by tissue crowding
by: Falcó, Carles, et al.
Published: (2024)
by: Falcó, Carles, et al.
Published: (2024)
Cover Learning for Large-Scale Topology Representation
by: Scoccola, Luis, et al.
Published: (2025)
by: Scoccola, Luis, et al.
Published: (2025)
Towards a consensus on rheological models for shear waves in soft tissues
by: Parker, Kevin J., et al.
Published: (2019)
by: Parker, Kevin J., et al.
Published: (2019)
Grounded persistent path homology: a stable, topological descriptor for weighted digraphs
by: Chaplin, Thomas, et al.
Published: (2022)
by: Chaplin, Thomas, et al.
Published: (2022)
Every group retraction can be realized as a topological retraction
by: Chocano, Pedro J.
Published: (2025)
by: Chocano, Pedro J.
Published: (2025)
Understanding Immune Dynamics in Liver Transplant Through Mathematical Modeling
by: Bruner, Julia, et al.
Published: (2024)
by: Bruner, Julia, et al.
Published: (2024)
Learning relationships in epidemiological data using graph neural networks
by: Wood, Anthony J, et al.
Published: (2026)
by: Wood, Anthony J, et al.
Published: (2026)
A multiscale discrete-to-continuum framework for structured population models
by: Agostinelli, Eleonora, et al.
Published: (2026)
by: Agostinelli, Eleonora, et al.
Published: (2026)
Snakes partition their body to traverse large steps stably
by: Gart, Sean W., et al.
Published: (2019)
by: Gart, Sean W., et al.
Published: (2019)
Histology-informed tiling of whole tissue sections improves the interpretability and predictability of cancer relapse and genetic alterations
by: Bonnaffé, Willem, et al.
Published: (2025)
by: Bonnaffé, Willem, et al.
Published: (2025)
Topological Sequence Analysis of Genomes: Delta Complex approaches
by: Liu, Jian, et al.
Published: (2025)
by: Liu, Jian, et al.
Published: (2025)
Dual network structure of the AV node
by: Maltsev, Anna V., et al.
Published: (2024)
by: Maltsev, Anna V., et al.
Published: (2024)
Similar Items
-
Topology of Multi-species Localization
by: Natarajan, Abhinav, et al.
Published: (2026) -
Topological shape transform for thymus structures
by: Yang, Haochen, et al.
Published: (2026) -
Persistent homology classifies parameter dependence of patterns in Turing systems
by: Spector, Reemon, et al.
Published: (2024) -
Topology across Scales on Heterogeneous Cell Data
by: Torras-Pérez, Maria, et al.
Published: (2025) -
Topological model selection: a case-study in tumour-induced angiogenesis
by: McDonald, Robert A, et al.
Published: (2025)