Modeling Diffusion and Permeation Across the Stratum Corneum Lipid Barrier
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| Format: | Preprint |
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2025
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| _version_ | 1866908773899042816 |
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| author | Thomas, Rinto Prabhakar, Praveen Ranganath Tobias, Douglas J. von Domaros, Michael |
| author_facet | Thomas, Rinto Prabhakar, Praveen Ranganath Tobias, Douglas J. von Domaros, Michael |
| contents | Human skin oils are a major sink for ozone in densely occupied indoor environments. Understanding how the resulting volatile and semivolatile organic oxidation products influence indoor air chemistry requires accurate representations not only of their emission into indoor air but also of their transport across the outermost skin barrier, the stratum corneum. Using molecular dynamics simulations, we investigate the passive permeation of acetone, 6-methyl-5-hepten-2-one, and water -- two representative products of skin-oil oxidation and a reference compound -- through a model stratum corneum lipid membrane. We determine position-dependent diffusivities using two complementary analyses based on the same set of simulations and evaluate their accuracy through a propagator analysis. The two approaches provide upper and lower bounds for the true diffusivity, which, when combined with previously reported free-energy profiles, yield permeabilities relevant for modeling macroscopic skin transport. Our results show that permeation is governed primarily by energetic barriers rather than by molecular mobility, and that the predicted transport coefficients vary by about one order of magnitude depending on the chosen diffusivity estimator. These findings provide molecular-level constraints for parameters used in indoor air chemistry models and establish a transferable framework for linking atomistic transport mechanisms to large-scale simulations of human exposure and indoor air quality. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2510_14606 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | Modeling Diffusion and Permeation Across the Stratum Corneum Lipid Barrier Thomas, Rinto Prabhakar, Praveen Ranganath Tobias, Douglas J. von Domaros, Michael Soft Condensed Matter Biological Physics Chemical Physics Human skin oils are a major sink for ozone in densely occupied indoor environments. Understanding how the resulting volatile and semivolatile organic oxidation products influence indoor air chemistry requires accurate representations not only of their emission into indoor air but also of their transport across the outermost skin barrier, the stratum corneum. Using molecular dynamics simulations, we investigate the passive permeation of acetone, 6-methyl-5-hepten-2-one, and water -- two representative products of skin-oil oxidation and a reference compound -- through a model stratum corneum lipid membrane. We determine position-dependent diffusivities using two complementary analyses based on the same set of simulations and evaluate their accuracy through a propagator analysis. The two approaches provide upper and lower bounds for the true diffusivity, which, when combined with previously reported free-energy profiles, yield permeabilities relevant for modeling macroscopic skin transport. Our results show that permeation is governed primarily by energetic barriers rather than by molecular mobility, and that the predicted transport coefficients vary by about one order of magnitude depending on the chosen diffusivity estimator. These findings provide molecular-level constraints for parameters used in indoor air chemistry models and establish a transferable framework for linking atomistic transport mechanisms to large-scale simulations of human exposure and indoor air quality. |
| title | Modeling Diffusion and Permeation Across the Stratum Corneum Lipid Barrier |
| topic | Soft Condensed Matter Biological Physics Chemical Physics |
| url | https://arxiv.org/abs/2510.14606 |