Simulation-free Structure Learning for Stochastic Dynamics
Fuente:
arXiv
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| Main Authors: | Rimawi-Fine, Noah El, Stecklov, Adam, Nelson, Lucas, Blanchette, Mathieu, Tong, Alexander, Zhang, Stephen Y., Atanackovic, Lazar |
|---|---|
| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | |
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