Training Diverse Graph Experts for Ensembles: A Systematic Empirical Study

Fuente: arXiv
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Autores principales: Deng, Gangda, Yang, Yuxin, Akgül, Ömer Faruk, Zeng, Hanqing, Xia, Yinglong, Kannan, Rajgopal, Prasanna, Viktor
Formato: Preprint
Publicado: 2025
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author Deng, Gangda
Yang, Yuxin
Akgül, Ömer Faruk
Zeng, Hanqing
Xia, Yinglong
Kannan, Rajgopal
Prasanna, Viktor
author_facet Deng, Gangda
Yang, Yuxin
Akgül, Ömer Faruk
Zeng, Hanqing
Xia, Yinglong
Kannan, Rajgopal
Prasanna, Viktor
contents Graph Neural Networks (GNNs) have become essential tools for learning on relational data, yet the performance of a single GNN is often limited by the heterogeneity present in real-world graphs. Recent advances in Mixture-of-Experts (MoE) frameworks demonstrate that assembling multiple, explicitly diverse GNNs with distinct generalization patterns can significantly improve performance. In this work, we present the first systematic empirical study of expert-level diversification techniques for GNN ensembles. Evaluating 20 diversification strategies -- including random re-initialization, hyperparameter tuning, architectural variation, directionality modeling, and training data partitioning -- across 14 node classification benchmarks, we construct and analyze over 200 ensemble variants. Our comprehensive evaluation examines each technique in terms of expert diversity, complementarity, and ensemble performance. We also uncovers mechanistic insights into training maximally diverse experts. These findings provide actionable guidance for expert training and the design of effective MoE frameworks on graph data. Our code is available at https://github.com/Hydrapse/bench-gnn-diversification.
format Preprint
id arxiv_https___arxiv_org_abs_2510_18370
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Training Diverse Graph Experts for Ensembles: A Systematic Empirical Study
Deng, Gangda
Yang, Yuxin
Akgül, Ömer Faruk
Zeng, Hanqing
Xia, Yinglong
Kannan, Rajgopal
Prasanna, Viktor
Machine Learning
Graph Neural Networks (GNNs) have become essential tools for learning on relational data, yet the performance of a single GNN is often limited by the heterogeneity present in real-world graphs. Recent advances in Mixture-of-Experts (MoE) frameworks demonstrate that assembling multiple, explicitly diverse GNNs with distinct generalization patterns can significantly improve performance. In this work, we present the first systematic empirical study of expert-level diversification techniques for GNN ensembles. Evaluating 20 diversification strategies -- including random re-initialization, hyperparameter tuning, architectural variation, directionality modeling, and training data partitioning -- across 14 node classification benchmarks, we construct and analyze over 200 ensemble variants. Our comprehensive evaluation examines each technique in terms of expert diversity, complementarity, and ensemble performance. We also uncovers mechanistic insights into training maximally diverse experts. These findings provide actionable guidance for expert training and the design of effective MoE frameworks on graph data. Our code is available at https://github.com/Hydrapse/bench-gnn-diversification.
title Training Diverse Graph Experts for Ensembles: A Systematic Empirical Study
topic Machine Learning
url https://arxiv.org/abs/2510.18370