CIPHER: Scalable Time Series Analysis for Physical Sciences with Application to Solar Wind Phenomena

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Main Authors: Kobayashi, Jasmine R., Martin, Daniela, Filho, Valmir P Moraes, O'Brien, Connor, Hong, Jinsu, Saikia, Sudeshna Boro, Lamdouar, Hala, Miles, Nathan D., Scoczynski, Marcella, Stone, Mavis, Sundaresan, Sairam, Jungbluth, Anna, Muñoz-Jaramillo, Andrés, Samara, Evangelia, Gallego, Joseph
Format: Preprint
Published: 2025
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author Kobayashi, Jasmine R.
Martin, Daniela
Filho, Valmir P Moraes
O'Brien, Connor
Hong, Jinsu
Saikia, Sudeshna Boro
Lamdouar, Hala
Miles, Nathan D.
Scoczynski, Marcella
Stone, Mavis
Sundaresan, Sairam
Jungbluth, Anna
Muñoz-Jaramillo, Andrés
Samara, Evangelia
Gallego, Joseph
author_facet Kobayashi, Jasmine R.
Martin, Daniela
Filho, Valmir P Moraes
O'Brien, Connor
Hong, Jinsu
Saikia, Sudeshna Boro
Lamdouar, Hala
Miles, Nathan D.
Scoczynski, Marcella
Stone, Mavis
Sundaresan, Sairam
Jungbluth, Anna
Muñoz-Jaramillo, Andrés
Samara, Evangelia
Gallego, Joseph
contents Labeling or classifying time series is a persistent challenge in the physical sciences, where expert annotations are scarce, costly, and often inconsistent. Yet robust labeling is essential to enable machine learning models for understanding, prediction, and forecasting. We present the \textit{Clustering and Indexation Pipeline with Human Evaluation for Recognition} (CIPHER), a framework designed to accelerate large-scale labeling of complex time series in physics. CIPHER integrates \textit{indexable Symbolic Aggregate approXimation} (iSAX) for interpretable compression and indexing, density-based clustering (HDBSCAN) to group recurring phenomena, and a human-in-the-loop step for efficient expert validation. Representative samples are labeled by domain scientists, and these annotations are propagated across clusters to yield systematic, scalable classifications. We evaluate CIPHER on the task of classifying solar wind phenomena in OMNI data, a central challenge in space weather research, showing that the framework recovers meaningful phenomena such as coronal mass ejections and stream interaction regions. Beyond this case study, CIPHER highlights a general strategy for combining symbolic representations, unsupervised learning, and expert knowledge to address label scarcity in time series across the physical sciences. The code and configuration files used in this study are publicly available to support reproducibility.
format Preprint
id arxiv_https___arxiv_org_abs_2510_21022
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle CIPHER: Scalable Time Series Analysis for Physical Sciences with Application to Solar Wind Phenomena
Kobayashi, Jasmine R.
Martin, Daniela
Filho, Valmir P Moraes
O'Brien, Connor
Hong, Jinsu
Saikia, Sudeshna Boro
Lamdouar, Hala
Miles, Nathan D.
Scoczynski, Marcella
Stone, Mavis
Sundaresan, Sairam
Jungbluth, Anna
Muñoz-Jaramillo, Andrés
Samara, Evangelia
Gallego, Joseph
Machine Learning
Solar and Stellar Astrophysics
Labeling or classifying time series is a persistent challenge in the physical sciences, where expert annotations are scarce, costly, and often inconsistent. Yet robust labeling is essential to enable machine learning models for understanding, prediction, and forecasting. We present the \textit{Clustering and Indexation Pipeline with Human Evaluation for Recognition} (CIPHER), a framework designed to accelerate large-scale labeling of complex time series in physics. CIPHER integrates \textit{indexable Symbolic Aggregate approXimation} (iSAX) for interpretable compression and indexing, density-based clustering (HDBSCAN) to group recurring phenomena, and a human-in-the-loop step for efficient expert validation. Representative samples are labeled by domain scientists, and these annotations are propagated across clusters to yield systematic, scalable classifications. We evaluate CIPHER on the task of classifying solar wind phenomena in OMNI data, a central challenge in space weather research, showing that the framework recovers meaningful phenomena such as coronal mass ejections and stream interaction regions. Beyond this case study, CIPHER highlights a general strategy for combining symbolic representations, unsupervised learning, and expert knowledge to address label scarcity in time series across the physical sciences. The code and configuration files used in this study are publicly available to support reproducibility.
title CIPHER: Scalable Time Series Analysis for Physical Sciences with Application to Solar Wind Phenomena
topic Machine Learning
Solar and Stellar Astrophysics
url https://arxiv.org/abs/2510.21022