Gosling Designer: a Platform to Democratize Construction and Sharing of Genomics Data Visualization Tools
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arXiv
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| Format: | Preprint |
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2025
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| author | L'Yi, Sehi Conroy, John Misner, Priya Kouřil, David Brandt, Astrid van den Choy, Lisa Abdennur, Nezar Gehlenborg, Nils |
| author_facet | L'Yi, Sehi Conroy, John Misner, Priya Kouřil, David Brandt, Astrid van den Choy, Lisa Abdennur, Nezar Gehlenborg, Nils |
| contents | Analysis of genomics data is central to nearly all areas of modern biology. Despite significant progress in artificial intelligence (AI) and computational methods, these technologies require significant human oversight to generate novel and reliable biological insights. Consequently, the genomics community has developed a substantial number of diverse visualization approaches and a proliferation of tools that biologists rely on in their data analysis workflows. While there are a few commonly used visualization tools for genomics data, many tools target specific use cases for genomics data interpretation and offer only a limited, predefined set of visualization types. Moreover, static visualizations often fail to support exploratory analysis. Developing interactive visualizations and tools typically requires significant time and technical expertise, even when supported by modern LLM-powered coding assistants, and the resulting visualizations can be difficult to share among collaborators. We developed Gosling Designer, an all-in-one platform for editing, exploring, and sharing visualizations of genomics data. Gosling Designer addresses four key challenges observed in existing genomics visualization tools: (1) limited versatility, (2) difficulty of visualization authoring, (3) complexity of data management, and (4) barriers to sharing and collaboration. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2510_24888 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | Gosling Designer: a Platform to Democratize Construction and Sharing of Genomics Data Visualization Tools L'Yi, Sehi Conroy, John Misner, Priya Kouřil, David Brandt, Astrid van den Choy, Lisa Abdennur, Nezar Gehlenborg, Nils Genomics Analysis of genomics data is central to nearly all areas of modern biology. Despite significant progress in artificial intelligence (AI) and computational methods, these technologies require significant human oversight to generate novel and reliable biological insights. Consequently, the genomics community has developed a substantial number of diverse visualization approaches and a proliferation of tools that biologists rely on in their data analysis workflows. While there are a few commonly used visualization tools for genomics data, many tools target specific use cases for genomics data interpretation and offer only a limited, predefined set of visualization types. Moreover, static visualizations often fail to support exploratory analysis. Developing interactive visualizations and tools typically requires significant time and technical expertise, even when supported by modern LLM-powered coding assistants, and the resulting visualizations can be difficult to share among collaborators. We developed Gosling Designer, an all-in-one platform for editing, exploring, and sharing visualizations of genomics data. Gosling Designer addresses four key challenges observed in existing genomics visualization tools: (1) limited versatility, (2) difficulty of visualization authoring, (3) complexity of data management, and (4) barriers to sharing and collaboration. |
| title | Gosling Designer: a Platform to Democratize Construction and Sharing of Genomics Data Visualization Tools |
| topic | Genomics |
| url | https://arxiv.org/abs/2510.24888 |