Hierarchical Bayesian Model for Gene Deconvolution and Functional Analysis in Human Endometrium Across the Menstrual Cycle
Fuente:
arXiv
Saved in:
| Main Authors: | Su, Crystal, Yu, Kuai, Shao, Mingyuan, Bauer, Daniel |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
CFM-GP: Unified Conditional Flow Matching to Learn Gene Perturbation Across Cell Types
by: Abir, Abrar Rahman, et al.
Published: (2025)
by: Abir, Abrar Rahman, et al.
Published: (2025)
Generative Language Models on Nucleotide Sequences of Human Genes
by: Ihtiyar, Musa Nuri, et al.
Published: (2023)
by: Ihtiyar, Musa Nuri, et al.
Published: (2023)
Integrating Ontologies with Large Language Models for Enhanced Control Systems in Chemical Engineering
by: Su, Crystal, et al.
Published: (2025)
by: Su, Crystal, et al.
Published: (2025)
Annotation-Informed Block-Sparse Bayesian Modeling for cis-Expression Prediction
by: Huang, Lei, et al.
Published: (2026)
by: Huang, Lei, et al.
Published: (2026)
A Comparative Analysis of Gene Expression Profiling by Statistical and Machine Learning Approaches
by: Bontonou, Myriam, et al.
Published: (2024)
by: Bontonou, Myriam, et al.
Published: (2024)
Modeling Gene Expression Distributional Shifts for Unseen Genetic Perturbations
by: Ramakrishnan, Kalyan, et al.
Published: (2025)
by: Ramakrishnan, Kalyan, et al.
Published: (2025)
A Standardized Framework For Evaluating Gene Expression Generative Models
by: Rubbi, Andrea, et al.
Published: (2026)
by: Rubbi, Andrea, et al.
Published: (2026)
Extending Sequence Length is Not All You Need: Effective Integration of Multimodal Signals for Gene Expression Prediction
by: Yang, Zhao, et al.
Published: (2026)
by: Yang, Zhao, et al.
Published: (2026)
Machine Learning-Based Analysis of Ebola Virus' Impact on Gene Expression in Nonhuman Primates
by: Rezapour, Mostafa, et al.
Published: (2024)
by: Rezapour, Mostafa, et al.
Published: (2024)
Scalable Single-Cell Gene Expression Generation with Latent Diffusion Models
by: Palla, Giovanni, et al.
Published: (2025)
by: Palla, Giovanni, et al.
Published: (2025)
Beyond Independent Genes: Learning Module-Inductive Representations for Gene Perturbation Prediction
by: Ruan, Jiafa, et al.
Published: (2026)
by: Ruan, Jiafa, et al.
Published: (2026)
FGBERT: Function-Driven Pre-trained Gene Language Model for Metagenomics
by: Duan, ChenRui, et al.
Published: (2024)
by: Duan, ChenRui, et al.
Published: (2024)
Predicting Gene Disease Associations in Type 2 Diabetes Using Machine Learning on Single-Cell RNA-Seq Data
by: Toledo, Maria De La Luz Lomboy, et al.
Published: (2026)
by: Toledo, Maria De La Luz Lomboy, et al.
Published: (2026)
Knowledge-guided Contextual Gene Set Analysis Using Large Language Models
by: Wang, Zhizheng, et al.
Published: (2025)
by: Wang, Zhizheng, et al.
Published: (2025)
Disentangling Interpretable Factors with Supervised Independent Subspace Principal Component Analysis
by: Su, Jiayu, et al.
Published: (2024)
by: Su, Jiayu, et al.
Published: (2024)
HR-VILAGE-3K3M: A Human Respiratory Viral Immunization Longitudinal Gene Expression Dataset for Systems Immunity
by: Sun, Xuejun, et al.
Published: (2025)
by: Sun, Xuejun, et al.
Published: (2025)
Feature Dimensionality Outweighs Model Complexity in Breast Cancer Subtype Classification Using TCGA-BRCA Gene Expression Data
by: Hasani, Meena Al
Published: (2026)
by: Hasani, Meena Al
Published: (2026)
Multi-omic Causal Discovery using Genotypes and Gene Expression
by: Asiedu, Stephen, et al.
Published: (2025)
by: Asiedu, Stephen, et al.
Published: (2025)
On the Recoverability of Causal Relations from Bulk Gene Expression Data
by: Luo, Gongxu, et al.
Published: (2026)
by: Luo, Gongxu, et al.
Published: (2026)
Whole Genome Transformer for Gene Interaction Effects in Microbiome Habitat Specificity
by: Li, Zhufeng, et al.
Published: (2024)
by: Li, Zhufeng, et al.
Published: (2024)
Machine Learning-Based Prediction of Key Genes Correlated to the Subretinal Lesion Severity in a Mouse Model of Age-Related Macular Degeneration
by: Yan, Kuan, et al.
Published: (2024)
by: Yan, Kuan, et al.
Published: (2024)
ProtGO: A Transformer based Fusion Model for accurately predicting Gene Ontology (GO) Terms from full scale Protein Sequences
by: Tamir, Azwad, et al.
Published: (2024)
by: Tamir, Azwad, et al.
Published: (2024)
SPACE: Your Genomic Profile Predictor is a Powerful DNA Foundation Model
by: Yang, Zhao, et al.
Published: (2025)
by: Yang, Zhao, et al.
Published: (2025)
Central Dogma Transformer III: Interpretable AI Across DNA, RNA, and Protein
by: Ota, Nobuyuki
Published: (2026)
by: Ota, Nobuyuki
Published: (2026)
Adversarial Domain Adaptation Enables Knowledge Transfer Across Heterogeneous RNA-Seq Datasets
by: Dradjat, Kevin, et al.
Published: (2026)
by: Dradjat, Kevin, et al.
Published: (2026)
D3LM: A Discrete DNA Diffusion Language Model for Bidirectional DNA Understanding and Generation
by: Yang, Zhao, et al.
Published: (2026)
by: Yang, Zhao, et al.
Published: (2026)
Exploring Gene Regulatory Interaction Networks and predicting therapeutic molecules for Hypopharyngeal Cancer and EGFR-mutated lung adenocarcinoma
by: Bhattacharjya, Abanti, et al.
Published: (2024)
by: Bhattacharjya, Abanti, et al.
Published: (2024)
GenoTEX: An LLM Agent Benchmark for Automated Gene Expression Data Analysis
by: Liu, Haoyang, et al.
Published: (2024)
by: Liu, Haoyang, et al.
Published: (2024)
Pretrained-Guided Conditional Diffusion Models for Microbiome Data Analysis
by: Shi, Xinyuan, et al.
Published: (2024)
by: Shi, Xinyuan, et al.
Published: (2024)
Machine Learning-Based Genomic Linguistic Analysis (Gene Sequence Feature Learning): A Case Study on Predicting Heavy Metal Response Genes in Rice
by: Yang, Ruiqi, et al.
Published: (2025)
by: Yang, Ruiqi, et al.
Published: (2025)
PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis
by: Wu, Yan, et al.
Published: (2024)
by: Wu, Yan, et al.
Published: (2024)
BSM: Small but Powerful Biological Sequence Model for Genes and Proteins
by: Xiang, Weixi, et al.
Published: (2024)
by: Xiang, Weixi, et al.
Published: (2024)
GeneMamba: An Efficient and Effective Foundation Model on Single Cell Data
by: Qi, Cong, et al.
Published: (2025)
by: Qi, Cong, et al.
Published: (2025)
GeneZip: Region-Aware Compression for Long Context DNA Modeling
by: Zhao, Jianan, et al.
Published: (2026)
by: Zhao, Jianan, et al.
Published: (2026)
BaGGLS: A Bayesian Shrinkage Framework for Interpretable Modeling of Interactions in High-Dimensional Biological Data
by: Lemanczyk, Marta S., et al.
Published: (2025)
by: Lemanczyk, Marta S., et al.
Published: (2025)
scMamba: A Pre-Trained Model for Single-Nucleus RNA Sequencing Analysis in Neurodegenerative Disorders
by: Oh, Gyutaek, et al.
Published: (2025)
by: Oh, Gyutaek, et al.
Published: (2025)
ShortListing Model: A Streamlined SimplexDiffusion for Discrete Variable Generation
by: Song, Yuxuan, et al.
Published: (2025)
by: Song, Yuxuan, et al.
Published: (2025)
Unlocking the Power of Multi-institutional Data: Integrating and Harmonizing Genomic Data Across Institutions
by: Chen, Yuan, et al.
Published: (2024)
by: Chen, Yuan, et al.
Published: (2024)
DNABERT-2: Fine-Tuning a Genomic Language Model for Colorectal Gene Enhancer Classification
by: King, Darren, et al.
Published: (2025)
by: King, Darren, et al.
Published: (2025)
Regulatory DNA sequence Design with Reinforcement Learning
by: Yang, Zhao, et al.
Published: (2025)
by: Yang, Zhao, et al.
Published: (2025)
Similar Items
-
CFM-GP: Unified Conditional Flow Matching to Learn Gene Perturbation Across Cell Types
by: Abir, Abrar Rahman, et al.
Published: (2025) -
Generative Language Models on Nucleotide Sequences of Human Genes
by: Ihtiyar, Musa Nuri, et al.
Published: (2023) -
Integrating Ontologies with Large Language Models for Enhanced Control Systems in Chemical Engineering
by: Su, Crystal, et al.
Published: (2025) -
Annotation-Informed Block-Sparse Bayesian Modeling for cis-Expression Prediction
by: Huang, Lei, et al.
Published: (2026) -
A Comparative Analysis of Gene Expression Profiling by Statistical and Machine Learning Approaches
by: Bontonou, Myriam, et al.
Published: (2024)