AI Agents in Drug Discovery

Fuente: arXiv
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Détails bibliographiques
Auteurs principaux: Seal, Srijit, Huynh, Dinh Long, Chelbi, Moudather, Khosravi, Sara, Kumar, Ankur, Thieme, Mattson, Wilks, Isaac, Davies, Mark, Mustali, Jessica, Sun, Yannick, Edwards, Nick, Boiko, Daniil, Tyrin, Andrei, Selinger, Douglas W., Parikh, Ayaan, Vijayan, Rahul, Kasbekar, Shoman, Reid, Dylan, Bender, Andreas, Spjuth, Ola
Format: Preprint
Publié: 2025
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author Seal, Srijit
Huynh, Dinh Long
Chelbi, Moudather
Khosravi, Sara
Kumar, Ankur
Thieme, Mattson
Wilks, Isaac
Davies, Mark
Mustali, Jessica
Sun, Yannick
Edwards, Nick
Boiko, Daniil
Tyrin, Andrei
Selinger, Douglas W.
Parikh, Ayaan
Vijayan, Rahul
Kasbekar, Shoman
Reid, Dylan
Bender, Andreas
Spjuth, Ola
author_facet Seal, Srijit
Huynh, Dinh Long
Chelbi, Moudather
Khosravi, Sara
Kumar, Ankur
Thieme, Mattson
Wilks, Isaac
Davies, Mark
Mustali, Jessica
Sun, Yannick
Edwards, Nick
Boiko, Daniil
Tyrin, Andrei
Selinger, Douglas W.
Parikh, Ayaan
Vijayan, Rahul
Kasbekar, Shoman
Reid, Dylan
Bender, Andreas
Spjuth, Ola
contents Artificial intelligence (AI) agents are emerging as transformative tools in drug discovery, with the ability to autonomously reason, act, and learn through complicated research workflows. Building on large language models (LLMs) coupled with perception, computation, action, and memory tools, these agentic AI systems could integrate diverse biomedical data, execute tasks, carry out experiments via robotic platforms, and iteratively refine hypotheses in closed loops. We provide a conceptual and technical overview of agentic AI architectures, ranging from ReAct and Reflection to Supervisor and Swarm systems, and illustrate their applications across key stages of drug discovery, including literature synthesis, toxicity prediction, automated protocol generation, small-molecule synthesis, drug repurposing, and end-to-end decision-making. To our knowledge, this represents the first comprehensive work to present real-world implementations and quantifiable impacts of agentic AI systems deployed in operational drug discovery settings. Early implementations demonstrate substantial gains in speed, reproducibility, and scalability, compressing workflows that once took months into hours while maintaining scientific traceability. We discuss the current challenges related to data heterogeneity, system reliability, privacy, and benchmarking, and outline future directions towards technology in support of science and translation.
format Preprint
id arxiv_https___arxiv_org_abs_2510_27130
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle AI Agents in Drug Discovery
Seal, Srijit
Huynh, Dinh Long
Chelbi, Moudather
Khosravi, Sara
Kumar, Ankur
Thieme, Mattson
Wilks, Isaac
Davies, Mark
Mustali, Jessica
Sun, Yannick
Edwards, Nick
Boiko, Daniil
Tyrin, Andrei
Selinger, Douglas W.
Parikh, Ayaan
Vijayan, Rahul
Kasbekar, Shoman
Reid, Dylan
Bender, Andreas
Spjuth, Ola
Machine Learning
Artificial intelligence (AI) agents are emerging as transformative tools in drug discovery, with the ability to autonomously reason, act, and learn through complicated research workflows. Building on large language models (LLMs) coupled with perception, computation, action, and memory tools, these agentic AI systems could integrate diverse biomedical data, execute tasks, carry out experiments via robotic platforms, and iteratively refine hypotheses in closed loops. We provide a conceptual and technical overview of agentic AI architectures, ranging from ReAct and Reflection to Supervisor and Swarm systems, and illustrate their applications across key stages of drug discovery, including literature synthesis, toxicity prediction, automated protocol generation, small-molecule synthesis, drug repurposing, and end-to-end decision-making. To our knowledge, this represents the first comprehensive work to present real-world implementations and quantifiable impacts of agentic AI systems deployed in operational drug discovery settings. Early implementations demonstrate substantial gains in speed, reproducibility, and scalability, compressing workflows that once took months into hours while maintaining scientific traceability. We discuss the current challenges related to data heterogeneity, system reliability, privacy, and benchmarking, and outline future directions towards technology in support of science and translation.
title AI Agents in Drug Discovery
topic Machine Learning
url https://arxiv.org/abs/2510.27130