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Hauptverfasser: Bench, Ciaran, Pfeffer, Oskar, Desai, Vivek, Moulaeifard, Mohammad, Coquelin, Loïc, Charlton, Peter H., Strodthoff, Nils, Hegemann, Nando, Aston, Philip J., Thompson, Andrew
Format: Preprint
Veröffentlicht: 2025
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Online-Zugang:https://arxiv.org/abs/2511.00301
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author Bench, Ciaran
Pfeffer, Oskar
Desai, Vivek
Moulaeifard, Mohammad
Coquelin, Loïc
Charlton, Peter H.
Strodthoff, Nils
Hegemann, Nando
Aston, Philip J.
Thompson, Andrew
author_facet Bench, Ciaran
Pfeffer, Oskar
Desai, Vivek
Moulaeifard, Mohammad
Coquelin, Loïc
Charlton, Peter H.
Strodthoff, Nils
Hegemann, Nando
Aston, Philip J.
Thompson, Andrew
contents In principle, deep learning models trained on medical time-series, including wearable photoplethysmography (PPG) sensor data, can provide a means to continuously monitor physiological parameters outside of clinical settings. However, there is considerable risk of poor performance when deployed in practical measurement scenarios leading to negative patient outcomes. Reliable uncertainties accompanying predictions can provide guidance to clinicians in their interpretation of the trustworthiness of model outputs. It is therefore of interest to compare the effectiveness of different approaches. Here we implement an unprecedented set of eight uncertainty quantification (UQ) techniques to models trained on two clinically relevant prediction tasks: Atrial Fibrillation (AF) detection (classification), and two variants of blood pressure regression. We formulate a comprehensive evaluation procedure to enable a rigorous comparison of these approaches. We observe a complex picture of uncertainty reliability across the different techniques, where the most optimal for a given task depends on the chosen expression of uncertainty, evaluation metric, and scale of reliability assessed. We find that assessing local calibration and adaptivity provides practically relevant insights about model behaviour that otherwise cannot be acquired using more commonly implemented global reliability metrics. We emphasise that criteria for evaluating UQ techniques should cater to the model's practical use case, where the use of a small number of measurements per patient places a premium on achieving small-scale reliability for the chosen expression of uncertainty, while preserving as much predictive performance as possible.
format Preprint
id arxiv_https___arxiv_org_abs_2511_00301
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle A systematic evaluation of uncertainty quantification techniques in deep learning: a case study in photoplethysmography signal analysis
Bench, Ciaran
Pfeffer, Oskar
Desai, Vivek
Moulaeifard, Mohammad
Coquelin, Loïc
Charlton, Peter H.
Strodthoff, Nils
Hegemann, Nando
Aston, Philip J.
Thompson, Andrew
Machine Learning
Medical Physics
In principle, deep learning models trained on medical time-series, including wearable photoplethysmography (PPG) sensor data, can provide a means to continuously monitor physiological parameters outside of clinical settings. However, there is considerable risk of poor performance when deployed in practical measurement scenarios leading to negative patient outcomes. Reliable uncertainties accompanying predictions can provide guidance to clinicians in their interpretation of the trustworthiness of model outputs. It is therefore of interest to compare the effectiveness of different approaches. Here we implement an unprecedented set of eight uncertainty quantification (UQ) techniques to models trained on two clinically relevant prediction tasks: Atrial Fibrillation (AF) detection (classification), and two variants of blood pressure regression. We formulate a comprehensive evaluation procedure to enable a rigorous comparison of these approaches. We observe a complex picture of uncertainty reliability across the different techniques, where the most optimal for a given task depends on the chosen expression of uncertainty, evaluation metric, and scale of reliability assessed. We find that assessing local calibration and adaptivity provides practically relevant insights about model behaviour that otherwise cannot be acquired using more commonly implemented global reliability metrics. We emphasise that criteria for evaluating UQ techniques should cater to the model's practical use case, where the use of a small number of measurements per patient places a premium on achieving small-scale reliability for the chosen expression of uncertainty, while preserving as much predictive performance as possible.
title A systematic evaluation of uncertainty quantification techniques in deep learning: a case study in photoplethysmography signal analysis
topic Machine Learning
Medical Physics
url https://arxiv.org/abs/2511.00301