Which Similarity-Sensitive Entropy (Sentropy)?

Fuente: arXiv
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Main Authors: Nguyen, Phuc, Couch, Josiah, Bansal, Rahul, Morgan, Alexandra, Tam, Chris, Li, Miao, Arnaout, Rima, Arnaout, Ramy
Format: Preprint
Published: 2025
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author Nguyen, Phuc
Couch, Josiah
Bansal, Rahul
Morgan, Alexandra
Tam, Chris
Li, Miao
Arnaout, Rima
Arnaout, Ramy
author_facet Nguyen, Phuc
Couch, Josiah
Bansal, Rahul
Morgan, Alexandra
Tam, Chris
Li, Miao
Arnaout, Rima
Arnaout, Ramy
contents Shannon entropy is not the only entropy that is relevant to machine-learning datasets, nor possibly even the most important one. Traditional entropies such as Shannon entropy capture information represented by elements' frequencies but not the richer information encoded by their similarities and differences. Capturing the latter requires similarity-sensitive entropy (``sentropy''). Sentropy can be measured using either the recently developed Leinster-Cobbold-Reeve framework (LCR) or the newer Vendi score (VS). This raises the practical question of which one to use: LCR or VS. Here we address this question theoretically and numerically, using 53 large and well-known imaging and tabular datasets. We find that LCR and VS values can differ by orders of magnitude and are complementary, except in limiting cases. We show that both LCR and VS results depend on how similarities are scaled, and introduce the notion of ``half-distance'' to parameterize this dependence. We prove the VS provides an upper bound on LCR for all non-negative values of the Rényi-Hill order parameter, as well as for negative values in the special case that the similarity matrix is full rank. We conclude that VS is preferable only when a dataset's elements can be usefully interpreted as linear combinations of a more fundamental set of ``ur-elements'' or when the system that the dataset describes has a quantum-mechanical character. In the broader case where one simply wishes to capture the rich information encoded by elements' similarities and differences as well as their frequencies, we propose that LCR should be favored; nevertheless, for certain half-distances the two methods can complement each other.
format Preprint
id arxiv_https___arxiv_org_abs_2511_03849
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Which Similarity-Sensitive Entropy (Sentropy)?
Nguyen, Phuc
Couch, Josiah
Bansal, Rahul
Morgan, Alexandra
Tam, Chris
Li, Miao
Arnaout, Rima
Arnaout, Ramy
Information Theory
Machine Learning
Populations and Evolution
Shannon entropy is not the only entropy that is relevant to machine-learning datasets, nor possibly even the most important one. Traditional entropies such as Shannon entropy capture information represented by elements' frequencies but not the richer information encoded by their similarities and differences. Capturing the latter requires similarity-sensitive entropy (``sentropy''). Sentropy can be measured using either the recently developed Leinster-Cobbold-Reeve framework (LCR) or the newer Vendi score (VS). This raises the practical question of which one to use: LCR or VS. Here we address this question theoretically and numerically, using 53 large and well-known imaging and tabular datasets. We find that LCR and VS values can differ by orders of magnitude and are complementary, except in limiting cases. We show that both LCR and VS results depend on how similarities are scaled, and introduce the notion of ``half-distance'' to parameterize this dependence. We prove the VS provides an upper bound on LCR for all non-negative values of the Rényi-Hill order parameter, as well as for negative values in the special case that the similarity matrix is full rank. We conclude that VS is preferable only when a dataset's elements can be usefully interpreted as linear combinations of a more fundamental set of ``ur-elements'' or when the system that the dataset describes has a quantum-mechanical character. In the broader case where one simply wishes to capture the rich information encoded by elements' similarities and differences as well as their frequencies, we propose that LCR should be favored; nevertheless, for certain half-distances the two methods can complement each other.
title Which Similarity-Sensitive Entropy (Sentropy)?
topic Information Theory
Machine Learning
Populations and Evolution
url https://arxiv.org/abs/2511.03849