Trained on Tokens, Calibrated on Concepts: The Emergence of Semantic Calibration in LLMs

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Main Authors: Nakkiran, Preetum, Bradley, Arwen, Goliński, Adam, Ndiaye, Eugene, Kirchhof, Michael, Williamson, Sinead
Format: Preprint
Published: 2025
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author Nakkiran, Preetum
Bradley, Arwen
Goliński, Adam
Ndiaye, Eugene
Kirchhof, Michael
Williamson, Sinead
author_facet Nakkiran, Preetum
Bradley, Arwen
Goliński, Adam
Ndiaye, Eugene
Kirchhof, Michael
Williamson, Sinead
contents Large Language Models (LLMs) often lack meaningful confidence estimates for their outputs. While base LLMs are known to exhibit next-token calibration, it remains unclear whether they can assess confidence in the actual meaning of their responses beyond the token level. We find that, when using a certain sampling-based notion of semantic calibration, base LLMs are remarkably well-calibrated: they can meaningfully assess confidence in open-domain question-answering tasks, despite not being explicitly trained to do so. Our main theoretical contribution establishes a mechanism for why semantic calibration emerges as a byproduct of next-token prediction, leveraging a recent connection between calibration and local loss optimality. The theory relies on a general definition of "B-calibration," which is a notion of calibration parameterized by a choice of equivalence classes (semantic or otherwise). This theoretical mechanism leads to a testable prediction: base LLMs will be semantically calibrated when they can easily predict their own distribution over semantic answer classes before generating a response. We state three implications of this prediction, which we validate through experiments: (1) Base LLMs are semantically calibrated across question-answering tasks, (2) RL instruction-tuning systematically breaks this calibration, and (3) chain-of-thought reasoning breaks calibration. To our knowledge, our work provides the first principled explanation of when and why semantic calibration emerges in LLMs.
format Preprint
id arxiv_https___arxiv_org_abs_2511_04869
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Trained on Tokens, Calibrated on Concepts: The Emergence of Semantic Calibration in LLMs
Nakkiran, Preetum
Bradley, Arwen
Goliński, Adam
Ndiaye, Eugene
Kirchhof, Michael
Williamson, Sinead
Computation and Language
Machine Learning
Large Language Models (LLMs) often lack meaningful confidence estimates for their outputs. While base LLMs are known to exhibit next-token calibration, it remains unclear whether they can assess confidence in the actual meaning of their responses beyond the token level. We find that, when using a certain sampling-based notion of semantic calibration, base LLMs are remarkably well-calibrated: they can meaningfully assess confidence in open-domain question-answering tasks, despite not being explicitly trained to do so. Our main theoretical contribution establishes a mechanism for why semantic calibration emerges as a byproduct of next-token prediction, leveraging a recent connection between calibration and local loss optimality. The theory relies on a general definition of "B-calibration," which is a notion of calibration parameterized by a choice of equivalence classes (semantic or otherwise). This theoretical mechanism leads to a testable prediction: base LLMs will be semantically calibrated when they can easily predict their own distribution over semantic answer classes before generating a response. We state three implications of this prediction, which we validate through experiments: (1) Base LLMs are semantically calibrated across question-answering tasks, (2) RL instruction-tuning systematically breaks this calibration, and (3) chain-of-thought reasoning breaks calibration. To our knowledge, our work provides the first principled explanation of when and why semantic calibration emerges in LLMs.
title Trained on Tokens, Calibrated on Concepts: The Emergence of Semantic Calibration in LLMs
topic Computation and Language
Machine Learning
url https://arxiv.org/abs/2511.04869