Ambiguity-aware Truncated Flow Matching for Ambiguous Medical Image Segmentation

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Main Authors: Li, Fanding, Li, Xiangyu, Su, Xianghe, Qiu, Xingyu, Dong, Suyu, Wang, Wei, Wang, Kuanquan, Luo, Gongning, Li, Shuo
Format: Preprint
Published: 2025
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_version_ 1866918219120377856
author Li, Fanding
Li, Xiangyu
Su, Xianghe
Qiu, Xingyu
Dong, Suyu
Wang, Wei
Wang, Kuanquan
Luo, Gongning
Li, Shuo
author_facet Li, Fanding
Li, Xiangyu
Su, Xianghe
Qiu, Xingyu
Dong, Suyu
Wang, Wei
Wang, Kuanquan
Luo, Gongning
Li, Shuo
contents A simultaneous enhancement of accuracy and diversity of predictions remains a challenge in ambiguous medical image segmentation (AMIS) due to the inherent trade-offs. While truncated diffusion probabilistic models (TDPMs) hold strong potential with a paradigm optimization, existing TDPMs suffer from entangled accuracy and diversity of predictions with insufficient fidelity and plausibility. To address the aforementioned challenges, we propose Ambiguity-aware Truncated Flow Matching (ATFM), which introduces a novel inference paradigm and dedicated model components. Firstly, we propose Data-Hierarchical Inference, a redefinition of AMIS-specific inference paradigm, which enhances accuracy and diversity at data-distribution and data-sample level, respectively, for an effective disentanglement. Secondly, Gaussian Truncation Representation (GTR) is introduced to enhance both fidelity of predictions and reliability of truncation distribution, by explicitly modeling it as a Gaussian distribution at $T_{\text{trunc}}$ instead of using sampling-based approximations. Thirdly, Segmentation Flow Matching (SFM) is proposed to enhance the plausibility of diverse predictions by extending semantic-aware flow transformation in Flow Matching (FM). Comprehensive evaluations on LIDC and ISIC3 datasets demonstrate that ATFM outperforms SOTA methods and simultaneously achieves a more efficient inference. ATFM improves GED and HM-IoU by up to $12\%$ and $7.3\%$ compared to advanced methods.
format Preprint
id arxiv_https___arxiv_org_abs_2511_06857
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Ambiguity-aware Truncated Flow Matching for Ambiguous Medical Image Segmentation
Li, Fanding
Li, Xiangyu
Su, Xianghe
Qiu, Xingyu
Dong, Suyu
Wang, Wei
Wang, Kuanquan
Luo, Gongning
Li, Shuo
Computer Vision and Pattern Recognition
A simultaneous enhancement of accuracy and diversity of predictions remains a challenge in ambiguous medical image segmentation (AMIS) due to the inherent trade-offs. While truncated diffusion probabilistic models (TDPMs) hold strong potential with a paradigm optimization, existing TDPMs suffer from entangled accuracy and diversity of predictions with insufficient fidelity and plausibility. To address the aforementioned challenges, we propose Ambiguity-aware Truncated Flow Matching (ATFM), which introduces a novel inference paradigm and dedicated model components. Firstly, we propose Data-Hierarchical Inference, a redefinition of AMIS-specific inference paradigm, which enhances accuracy and diversity at data-distribution and data-sample level, respectively, for an effective disentanglement. Secondly, Gaussian Truncation Representation (GTR) is introduced to enhance both fidelity of predictions and reliability of truncation distribution, by explicitly modeling it as a Gaussian distribution at $T_{\text{trunc}}$ instead of using sampling-based approximations. Thirdly, Segmentation Flow Matching (SFM) is proposed to enhance the plausibility of diverse predictions by extending semantic-aware flow transformation in Flow Matching (FM). Comprehensive evaluations on LIDC and ISIC3 datasets demonstrate that ATFM outperforms SOTA methods and simultaneously achieves a more efficient inference. ATFM improves GED and HM-IoU by up to $12\%$ and $7.3\%$ compared to advanced methods.
title Ambiguity-aware Truncated Flow Matching for Ambiguous Medical Image Segmentation
topic Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2511.06857