Depth-enhanced molecular imaging with two-photon oblique plane microscopy

Fuente: arXiv
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Autori principali: Keomanee-Dizon, Kevin, Clenman, Yaakov, Duran, Alejandra, Ryabichko, Sergey, Hansen, Pauline, Borjigin, Tohn, Thornton, Richard, Toettcher, Jared E., McNamara, Harold M.
Natura: Preprint
Pubblicazione: 2025
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author Keomanee-Dizon, Kevin
Clenman, Yaakov
Duran, Alejandra
Ryabichko, Sergey
Hansen, Pauline
Borjigin, Tohn
Thornton, Richard
Toettcher, Jared E.
McNamara, Harold M.
author_facet Keomanee-Dizon, Kevin
Clenman, Yaakov
Duran, Alejandra
Ryabichko, Sergey
Hansen, Pauline
Borjigin, Tohn
Thornton, Richard
Toettcher, Jared E.
McNamara, Harold M.
contents High-numerical-aperture (NA) oblique plane microscopy enables noninvasive fluorescence imaging of subcellular dynamics without requiring radical sample modification. However, performance degrades at depth in multicellular specimens as scattering and refractive-index heterogeneity raise out-of-focus background. We report a two-photon oblique plane microscope that improves resolution at depth by combining high-NA single-objective detection with multiphoton plane illumination. The microscope achieves $\sim\!300$ nm lateral and $\sim\!650$ nm axial resolution, with single-molecule sensitivity in vivo. Compared with two-photon point scanning, the lower illumination NA delivers an order of magnitude lower peak intensity, enabling $>\!5\times$ faster volumetric acquisition (up to $3.25 \times 10^6$ voxels s$^{-1}$) with reduced photodamage. In multicellular contexts, near-infrared nonlinear excitation enhances contrast throughout the illumination depth by $\sim\!2\times$ and restores volumetric resolving power by $>\!2\times$ relative to linear excitation. We demonstrate these capabilities through molecular imaging of epithelial tissue, stem-cell-derived gastruloids, and living fruit fly embryos, including multicolor transcription-factor dynamics, optogenetic subcellular control, and single-mRNA tracking, all using standard glass-based mounting.
format Preprint
id arxiv_https___arxiv_org_abs_2511_09462
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Depth-enhanced molecular imaging with two-photon oblique plane microscopy
Keomanee-Dizon, Kevin
Clenman, Yaakov
Duran, Alejandra
Ryabichko, Sergey
Hansen, Pauline
Borjigin, Tohn
Thornton, Richard
Toettcher, Jared E.
McNamara, Harold M.
Optics
Biological Physics
Instrumentation and Detectors
High-numerical-aperture (NA) oblique plane microscopy enables noninvasive fluorescence imaging of subcellular dynamics without requiring radical sample modification. However, performance degrades at depth in multicellular specimens as scattering and refractive-index heterogeneity raise out-of-focus background. We report a two-photon oblique plane microscope that improves resolution at depth by combining high-NA single-objective detection with multiphoton plane illumination. The microscope achieves $\sim\!300$ nm lateral and $\sim\!650$ nm axial resolution, with single-molecule sensitivity in vivo. Compared with two-photon point scanning, the lower illumination NA delivers an order of magnitude lower peak intensity, enabling $>\!5\times$ faster volumetric acquisition (up to $3.25 \times 10^6$ voxels s$^{-1}$) with reduced photodamage. In multicellular contexts, near-infrared nonlinear excitation enhances contrast throughout the illumination depth by $\sim\!2\times$ and restores volumetric resolving power by $>\!2\times$ relative to linear excitation. We demonstrate these capabilities through molecular imaging of epithelial tissue, stem-cell-derived gastruloids, and living fruit fly embryos, including multicolor transcription-factor dynamics, optogenetic subcellular control, and single-mRNA tracking, all using standard glass-based mounting.
title Depth-enhanced molecular imaging with two-photon oblique plane microscopy
topic Optics
Biological Physics
Instrumentation and Detectors
url https://arxiv.org/abs/2511.09462