Prostate-VarBench: A Benchmark with Interpretable TabNet Framework for Prostate Cancer Variant Classification
Fuente:
arXiv
Saved in:
| Main Authors: | Tavara, Abraham Francisco Arellano, Kumar, Umesh, Pradeepkumar, Jathurshan, Sun, Jimeng |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Computational Mapping of Reactive Stroma in Prostate Cancer Yields Interpretable, Prognostic Biomarkers
by: Pleasure, Mara, et al.
Published: (2026)
by: Pleasure, Mara, et al.
Published: (2026)
Discovering Multi-omic Biomarkers for Prostate Cancer Severity Using Machine Learning
by: Zhou, Jefferson, et al.
Published: (2024)
by: Zhou, Jefferson, et al.
Published: (2024)
Prostate Cancer Classification Using Multimodal Feature Fusion and Explainable AI
by: Khan, Asma Sadia, et al.
Published: (2025)
by: Khan, Asma Sadia, et al.
Published: (2025)
PR-NET: Leveraging Pathway Refined Network Structures for Prostate Cancer Patient Condition Prediction
by: Li, R., et al.
Published: (2024)
by: Li, R., et al.
Published: (2024)
Predictive Significance of CD276/B7-H3 Expression in Baseline Biopsies of Advanced Prostate Carcinoma
by: Yusuf, Adam, et al.
Published: (2025)
by: Yusuf, Adam, et al.
Published: (2025)
RawBench: A Comprehensive Benchmarking Framework for Raw Nanopore Signal Analysis Techniques
by: Eris, Furkan, et al.
Published: (2025)
by: Eris, Furkan, et al.
Published: (2025)
Deformable MRI Sequence Registration for AI-based Prostate Cancer Diagnosis
by: Hering, Alessa, et al.
Published: (2024)
by: Hering, Alessa, et al.
Published: (2024)
VibeProteinBench: An Evaluation Benchmark for Language-interfaced Vibe Protein Design
by: Seo, Hyunjin, et al.
Published: (2026)
by: Seo, Hyunjin, et al.
Published: (2026)
Comparative Analysis of Hand-Crafted and Machine-Driven Histopathological Features for Prostate Cancer Classification and Segmentation
by: Baqain, Feda Bolus Al, et al.
Published: (2025)
by: Baqain, Feda Bolus Al, et al.
Published: (2025)
Quantum Variational Transformer Model for Enhanced Cancer Classification
by: Roosan, Don, et al.
Published: (2025)
by: Roosan, Don, et al.
Published: (2025)
LiveProteinBench: A Contamination-Free Benchmark for Assessing Models' Specialized Capabilities in Protein Science
by: Rong, Dingyi, et al.
Published: (2025)
by: Rong, Dingyi, et al.
Published: (2025)
Digital Volumetric Biopsy Cores Improve Gleason Grading of Prostate Cancer Using Deep Learning
by: Redekop, Ekaterina, et al.
Published: (2024)
by: Redekop, Ekaterina, et al.
Published: (2024)
MS-ConTab: Multi-Scale Contrastive Learning of Mutation Signatures for Pan Cancer Representation and Stratification
by: Dou, Yifan, et al.
Published: (2025)
by: Dou, Yifan, et al.
Published: (2025)
ViroBench: Benchmarking Nucleotide Foundation Models on Viral Genomics Tasks
by: Ye, Dongxin, et al.
Published: (2026)
by: Ye, Dongxin, et al.
Published: (2026)
A Modular Open Source Framework for Genomic Variant Calling
by: Bisoi, Ankita Vaishnobi, et al.
Published: (2024)
by: Bisoi, Ankita Vaishnobi, et al.
Published: (2024)
Foundations of Adaptive High-Level Tight Control of Prostate Cancer: A Path from From Terminal Disease to Chronic Condition
by: Phan, Trung V., et al.
Published: (2024)
by: Phan, Trung V., et al.
Published: (2024)
BixBench: a Comprehensive Benchmark for LLM-based Agents in Computational Biology
by: Mitchener, Ludovico, et al.
Published: (2025)
by: Mitchener, Ludovico, et al.
Published: (2025)
scSSL-Bench: Benchmarking Self-Supervised Learning for Single-Cell Data
by: Ovcharenko, Olga, et al.
Published: (2025)
by: Ovcharenko, Olga, et al.
Published: (2025)
Fractal Geometry and Fractional Calculus for Integrative Morphological Mapping of Breast Cancer Complexity
by: Das, Abhijeet, et al.
Published: (2025)
by: Das, Abhijeet, et al.
Published: (2025)
CAFA-evaluator: A Python Tool for Benchmarking Ontological Classification Methods
by: Piovesan, Damiano, et al.
Published: (2023)
by: Piovesan, Damiano, et al.
Published: (2023)
A Semi-Supervised Inf-Net Framework for CT-Based Lung Nodule Analysis with a Conceptual Extension Toward Genomic Integration
by: Mobini, Fateme, et al.
Published: (2025)
by: Mobini, Fateme, et al.
Published: (2025)
Benchmarking structure-based three-dimensional molecular generative models using GenBench3D: ligand conformation quality matters
by: Baillif, Benoit, et al.
Published: (2024)
by: Baillif, Benoit, et al.
Published: (2024)
NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics
by: Zhou, Jingbo, et al.
Published: (2024)
by: Zhou, Jingbo, et al.
Published: (2024)
DISC: Latent Diffusion Models with Self-Distillation from Separated Conditions for Prostate Cancer Grading
by: Ho, Man M., et al.
Published: (2024)
by: Ho, Man M., et al.
Published: (2024)
Donor-Aware scRNA-seq Benchmarks for IBD Classification
by: Muhire, Jonathan
Published: (2026)
by: Muhire, Jonathan
Published: (2026)
SpikGPT: A High-Accuracy and Interpretable Spiking Attention Framework for Single-Cell Annotation
by: Huang, Min, et al.
Published: (2025)
by: Huang, Min, et al.
Published: (2025)
Synergy vs. Noise: Performance-Guided Multimodal Fusion For Biochemical Recurrence-Free Survival in Prostate Cancer
by: Chang, Seth Alain, et al.
Published: (2025)
by: Chang, Seth Alain, et al.
Published: (2025)
Modeling HIF-ILK Interaction Using Continuous Petri Nets
by: Gilin, Viktor, et al.
Published: (2025)
by: Gilin, Viktor, et al.
Published: (2025)
GlucoBench: Curated List of Continuous Glucose Monitoring Datasets with Prediction Benchmarks
by: Sergazinov, Renat, et al.
Published: (2024)
by: Sergazinov, Renat, et al.
Published: (2024)
A Scalable Tool For Analyzing Genomic Variants Of Humans Using Knowledge Graphs and Machine Learning
by: Prasanna, Shivika, et al.
Published: (2024)
by: Prasanna, Shivika, et al.
Published: (2024)
Virtual Cells: From Conceptual Frameworks to Biomedical Applications
by: Bhardwaj, Saurabh, et al.
Published: (2025)
by: Bhardwaj, Saurabh, et al.
Published: (2025)
MM-DADM: Multimodal Drug-Aware Diffusion Model for Virtual Clinical Trials
by: Shao, Qian, et al.
Published: (2025)
by: Shao, Qian, et al.
Published: (2025)
Pharmacometrics Modeling via Physics-Informed Neural Networks: Integrating Time-Variant Absorption Rates and Fractional Calculus for Enhancing Prediction Accuracy
by: Ahmadi, Nazanin, et al.
Published: (2024)
by: Ahmadi, Nazanin, et al.
Published: (2024)
Beyond Black Boxes: Enhancing Interpretability of Transformers Trained on Neural Data
by: Freeman, Laurence, et al.
Published: (2025)
by: Freeman, Laurence, et al.
Published: (2025)
MATLAB Plasmonic Nanoparticle Virion Counting and Interpretation System in Urban Populations
by: Hong, Bryan, et al.
Published: (2023)
by: Hong, Bryan, et al.
Published: (2023)
Petri Net Modeling of Root Hair Response to Phosphate Starvation in Arabidopsis Thaliana
by: Fijn, Amber H. B., et al.
Published: (2025)
by: Fijn, Amber H. B., et al.
Published: (2025)
Protein Fold Classification at Scale: Benchmarking and Pretraining
by: Chen, Dexiong, et al.
Published: (2026)
by: Chen, Dexiong, et al.
Published: (2026)
CodonMPNN for Organism Specific and Codon Optimal Inverse Folding
by: Stark, Hannes, et al.
Published: (2024)
by: Stark, Hannes, et al.
Published: (2024)
Interpretable High-order Knowledge Graph Neural Network for Predicting Synthetic Lethality in Human Cancers
by: Chen, Xuexin, et al.
Published: (2025)
by: Chen, Xuexin, et al.
Published: (2025)
Deep Clustering for Blood Cell Classification and Quantification
by: Macarie-Ancau, Mihaela, et al.
Published: (2025)
by: Macarie-Ancau, Mihaela, et al.
Published: (2025)
Similar Items
-
Computational Mapping of Reactive Stroma in Prostate Cancer Yields Interpretable, Prognostic Biomarkers
by: Pleasure, Mara, et al.
Published: (2026) -
Discovering Multi-omic Biomarkers for Prostate Cancer Severity Using Machine Learning
by: Zhou, Jefferson, et al.
Published: (2024) -
Prostate Cancer Classification Using Multimodal Feature Fusion and Explainable AI
by: Khan, Asma Sadia, et al.
Published: (2025) -
PR-NET: Leveraging Pathway Refined Network Structures for Prostate Cancer Patient Condition Prediction
by: Li, R., et al.
Published: (2024) -
Predictive Significance of CD276/B7-H3 Expression in Baseline Biopsies of Advanced Prostate Carcinoma
by: Yusuf, Adam, et al.
Published: (2025)