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Hauptverfasser: Vargas, Kevin I. Ruiz, Galdino, Gabriel G., Ren, Tsang Ing, Cunha, Alexandre L.
Format: Preprint
Veröffentlicht: 2025
Schlagworte:
Online-Zugang:https://arxiv.org/abs/2511.13947
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author Vargas, Kevin I. Ruiz
Galdino, Gabriel G.
Ren, Tsang Ing
Cunha, Alexandre L.
author_facet Vargas, Kevin I. Ruiz
Galdino, Gabriel G.
Ren, Tsang Ing
Cunha, Alexandre L.
contents We investigate image segmentation of cells under the lens of scalar fields. Our goal is to learn a continuous scalar field on image domains such that its segmentation produces robust instances for cells present in images. This field is a function parameterized by the trained network, and its segmentation is realized by the watershed method. The fields we experiment with are solutions to the Poisson partial differential equation and a diffusion mimicking the steady-state solution of the heat equation. These solutions are obtained by minimizing just the field residuals, no regularization is needed, providing a robust regression capable of diminishing the adverse impacts of outliers in the training data and allowing for sharp cell boundaries. A single tensor is all that is needed to train a \unet\ thus simplifying implementation, lowering training and inference times, hence reducing energy consumption, and requiring a small memory footprint, all attractive features in edge computing. We present competitive results on public datasets from the literature and show that our novel, simple yet geometrically insightful approach can achieve excellent cell segmentation results.
format Preprint
id arxiv_https___arxiv_org_abs_2511_13947
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Single Tensor Cell Segmentation using Scalar Field Representations
Vargas, Kevin I. Ruiz
Galdino, Gabriel G.
Ren, Tsang Ing
Cunha, Alexandre L.
Computer Vision and Pattern Recognition
Machine Learning
I.4.6
We investigate image segmentation of cells under the lens of scalar fields. Our goal is to learn a continuous scalar field on image domains such that its segmentation produces robust instances for cells present in images. This field is a function parameterized by the trained network, and its segmentation is realized by the watershed method. The fields we experiment with are solutions to the Poisson partial differential equation and a diffusion mimicking the steady-state solution of the heat equation. These solutions are obtained by minimizing just the field residuals, no regularization is needed, providing a robust regression capable of diminishing the adverse impacts of outliers in the training data and allowing for sharp cell boundaries. A single tensor is all that is needed to train a \unet\ thus simplifying implementation, lowering training and inference times, hence reducing energy consumption, and requiring a small memory footprint, all attractive features in edge computing. We present competitive results on public datasets from the literature and show that our novel, simple yet geometrically insightful approach can achieve excellent cell segmentation results.
title Single Tensor Cell Segmentation using Scalar Field Representations
topic Computer Vision and Pattern Recognition
Machine Learning
I.4.6
url https://arxiv.org/abs/2511.13947