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Autori principali: Nossa, Gianna, Mougel, Eloïse, Alves, Brayan, Phan, Tan Toi, Siviglia, Alessio, Dinh, Thi Ngoc Anh, Lê, Thanh Phong, Lanz, Bernard, Cudalbu, Cristina
Natura: Preprint
Pubblicazione: 2025
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Accesso online:https://arxiv.org/abs/2512.11467
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author Nossa, Gianna
Mougel, Eloïse
Alves, Brayan
Phan, Tan Toi
Siviglia, Alessio
Dinh, Thi Ngoc Anh
Lê, Thanh Phong
Lanz, Bernard
Cudalbu, Cristina
author_facet Nossa, Gianna
Mougel, Eloïse
Alves, Brayan
Phan, Tan Toi
Siviglia, Alessio
Dinh, Thi Ngoc Anh
Lê, Thanh Phong
Lanz, Bernard
Cudalbu, Cristina
contents MR experiments are essential for studying brain metabolism, yet preclinical 1H-MRSI remains underdeveloped, with significant limitations in SNR, acquisition speed, and automated data processing. Although recent advances-such as accelerated sequences, denoising strategies, and ultra-high-field systems-have begun to reduce these barriers, preclinical MRSI still lags far behind the human research field in accessibility and routine use. Based on our expertise, we have created this guide that outlines a complete workflow for acquiring and analyzing high-quality fast MRSI data in rodent brains at ultra-high fields (9.4T and 14.1T), enabling novice users to perform reliable experiments using optimized MRSI sequences (FID-MRSI, SE-MRSI, and PRESS-MRSI) and standardized processing pipelines, while also highlighting strategies to further improve acquisition speed, coverage, and reproducibility. Overall, this paper provides a strong foundation for future methodological advances that will expand metabolic imaging capabilities and deepen insights into brain function and disease.
format Preprint
id arxiv_https___arxiv_org_abs_2512_11467
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Mastering Preclinical Fast MRSI: From Setup to Execution
Nossa, Gianna
Mougel, Eloïse
Alves, Brayan
Phan, Tan Toi
Siviglia, Alessio
Dinh, Thi Ngoc Anh
Lê, Thanh Phong
Lanz, Bernard
Cudalbu, Cristina
Medical Physics
MR experiments are essential for studying brain metabolism, yet preclinical 1H-MRSI remains underdeveloped, with significant limitations in SNR, acquisition speed, and automated data processing. Although recent advances-such as accelerated sequences, denoising strategies, and ultra-high-field systems-have begun to reduce these barriers, preclinical MRSI still lags far behind the human research field in accessibility and routine use. Based on our expertise, we have created this guide that outlines a complete workflow for acquiring and analyzing high-quality fast MRSI data in rodent brains at ultra-high fields (9.4T and 14.1T), enabling novice users to perform reliable experiments using optimized MRSI sequences (FID-MRSI, SE-MRSI, and PRESS-MRSI) and standardized processing pipelines, while also highlighting strategies to further improve acquisition speed, coverage, and reproducibility. Overall, this paper provides a strong foundation for future methodological advances that will expand metabolic imaging capabilities and deepen insights into brain function and disease.
title Mastering Preclinical Fast MRSI: From Setup to Execution
topic Medical Physics
url https://arxiv.org/abs/2512.11467