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Main Authors: Fan, Jiarong, Vo, Juhyun Park. Thi Phuong Thuy, Brunel, Nicolas
Format: Preprint
Published: 2025
Subjects:
Online Access:https://arxiv.org/abs/2512.14221
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author Fan, Jiarong
Vo, Juhyun Park. Thi Phuong Thuy
Brunel, Nicolas
author_facet Fan, Jiarong
Vo, Juhyun Park. Thi Phuong Thuy
Brunel, Nicolas
contents Conformal prediction (CP) offers a principled framework for uncertainty quantification, but it fails to guarantee coverage when faced with missing covariates. In addressing the heterogeneity induced by various missing patterns, Mask-Conditional Valid (MCV) Coverage has emerged as a more desirable property than Marginal Coverage. In this work, we adapt split CP to handle missing values by proposing a preimpute-mask-then-correct framework that can offer valid coverage. We show that our method provides guaranteed Marginal Coverage and Mask-Conditional Validity for general missing data mechanisms. A key component of our approach is a reweighted conformal prediction procedure that corrects the prediction sets after distributional imputation (multiple imputation) of the calibration dataset, making our method compatible with standard imputation pipelines. We derive two algorithms, and we show that they are approximately marginally valid and MCV. We evaluate them on synthetic and real-world datasets. It reduces significantly the width of prediction intervals w.r.t standard MCV methods, while maintaining the target guarantees.
format Preprint
id arxiv_https___arxiv_org_abs_2512_14221
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Weighted Conformal Prediction Provides Adaptive and Valid Mask-Conditional Coverage for General Missing Data Mechanisms
Fan, Jiarong
Vo, Juhyun Park. Thi Phuong Thuy
Brunel, Nicolas
Machine Learning
Conformal prediction (CP) offers a principled framework for uncertainty quantification, but it fails to guarantee coverage when faced with missing covariates. In addressing the heterogeneity induced by various missing patterns, Mask-Conditional Valid (MCV) Coverage has emerged as a more desirable property than Marginal Coverage. In this work, we adapt split CP to handle missing values by proposing a preimpute-mask-then-correct framework that can offer valid coverage. We show that our method provides guaranteed Marginal Coverage and Mask-Conditional Validity for general missing data mechanisms. A key component of our approach is a reweighted conformal prediction procedure that corrects the prediction sets after distributional imputation (multiple imputation) of the calibration dataset, making our method compatible with standard imputation pipelines. We derive two algorithms, and we show that they are approximately marginally valid and MCV. We evaluate them on synthetic and real-world datasets. It reduces significantly the width of prediction intervals w.r.t standard MCV methods, while maintaining the target guarantees.
title Weighted Conformal Prediction Provides Adaptive and Valid Mask-Conditional Coverage for General Missing Data Mechanisms
topic Machine Learning
url https://arxiv.org/abs/2512.14221