Improving Pre-trained Segmentation Models using Post-Processing

Fuente: arXiv
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Autores principales: Parida, Abhijeet, Capellán-Martín, Daniel, Jiang, Zhifan, Kulkarni, Nishad, Iyer, Krithika, Tapp, Austin, Anwar, Syed Muhammad, Ledesma-Carbayo, María J., Linguraru, Marius George
Formato: Preprint
Publicado: 2025
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author Parida, Abhijeet
Capellán-Martín, Daniel
Jiang, Zhifan
Kulkarni, Nishad
Iyer, Krithika
Tapp, Austin
Anwar, Syed Muhammad
Ledesma-Carbayo, María J.
Linguraru, Marius George
author_facet Parida, Abhijeet
Capellán-Martín, Daniel
Jiang, Zhifan
Kulkarni, Nishad
Iyer, Krithika
Tapp, Austin
Anwar, Syed Muhammad
Ledesma-Carbayo, María J.
Linguraru, Marius George
contents Gliomas are the most common malignant brain tumors in adults and are among the most lethal. Despite aggressive treatment, the median survival rate is less than 15 months. Accurate multiparametric MRI (mpMRI) tumor segmentation is critical for surgical planning, radiotherapy, and disease monitoring. While deep learning models have improved the accuracy of automated segmentation, large-scale pre-trained models generalize poorly and often underperform, producing systematic errors such as false positives, label swaps, and slice discontinuities in slices. These limitations are further compounded by unequal access to GPU resources and the growing environmental cost of large-scale model training. In this work, we propose adaptive post-processing techniques to refine the quality of glioma segmentations produced by large-scale pretrained models developed for various types of tumors. We demonstrated the techniques in multiple BraTS 2025 segmentation challenge tasks, with the ranking metric improving by 14.9 % for the sub-Saharan Africa challenge and 0.9% for the adult glioma challenge. This approach promotes a shift in brain tumor segmentation research from increasingly complex model architectures to efficient, clinically aligned post-processing strategies that are precise, computationally fair, and sustainable.
format Preprint
id arxiv_https___arxiv_org_abs_2512_14937
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Improving Pre-trained Segmentation Models using Post-Processing
Parida, Abhijeet
Capellán-Martín, Daniel
Jiang, Zhifan
Kulkarni, Nishad
Iyer, Krithika
Tapp, Austin
Anwar, Syed Muhammad
Ledesma-Carbayo, María J.
Linguraru, Marius George
Computer Vision and Pattern Recognition
Artificial Intelligence
Gliomas are the most common malignant brain tumors in adults and are among the most lethal. Despite aggressive treatment, the median survival rate is less than 15 months. Accurate multiparametric MRI (mpMRI) tumor segmentation is critical for surgical planning, radiotherapy, and disease monitoring. While deep learning models have improved the accuracy of automated segmentation, large-scale pre-trained models generalize poorly and often underperform, producing systematic errors such as false positives, label swaps, and slice discontinuities in slices. These limitations are further compounded by unequal access to GPU resources and the growing environmental cost of large-scale model training. In this work, we propose adaptive post-processing techniques to refine the quality of glioma segmentations produced by large-scale pretrained models developed for various types of tumors. We demonstrated the techniques in multiple BraTS 2025 segmentation challenge tasks, with the ranking metric improving by 14.9 % for the sub-Saharan Africa challenge and 0.9% for the adult glioma challenge. This approach promotes a shift in brain tumor segmentation research from increasingly complex model architectures to efficient, clinically aligned post-processing strategies that are precise, computationally fair, and sustainable.
title Improving Pre-trained Segmentation Models using Post-Processing
topic Computer Vision and Pattern Recognition
Artificial Intelligence
url https://arxiv.org/abs/2512.14937