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Main Authors: Dutta, Sayan, Lesniewski, Maria C., Qaisrani, Muhammad Nawaz, Noid, W. G., Andrienko, Denis, Nikoubashman, Arash
Format: Preprint
Published: 2025
Subjects:
Online Access:https://arxiv.org/abs/2512.16737
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author Dutta, Sayan
Lesniewski, Maria C.
Qaisrani, Muhammad Nawaz
Noid, W. G.
Andrienko, Denis
Nikoubashman, Arash
author_facet Dutta, Sayan
Lesniewski, Maria C.
Qaisrani, Muhammad Nawaz
Noid, W. G.
Andrienko, Denis
Nikoubashman, Arash
contents Conjugated organic molecules play a central role in a wide range of optoelectronic devices, including organic light-emitting diodes, organic field-effect transistors, and organic solar cells. A major bottleneck in the computational design of these materials is the discrepancy between simulation and experimental time and length scales. Coarse-graining (CG) offers a promising solution to bridge this gap by reducing redundant degrees of freedom and smoothing the potential energy landscape, thereby significantly accelerating molecular dynamics simulations. However, standard CG models are typically parameterized from homogeneous bulk simulations and assume density-independent effective interactions. As a consequence, they often fail to replicate inhomogeneous systems, such as (free-standing) thin films, due to an incorrect representation of liquid-vacuum interfacial properties. In this work, we develop a CG parametrization strategy that incorporates local-density-dependent potentials to capture material heterogeneities. We evaluate the methodology by simulating free-standing films and comparing interfacial orientational order parameters between all-atom and CG simulations. The resulting CG models accurately reproduce bulk densities and radial distribution functions as well as molecular orientations at the liquid-vacuum interface. This work paves the way for reliable, computation-driven predictions of atomically resolved interfacial ordering in organic molecular systems.
format Preprint
id arxiv_https___arxiv_org_abs_2512_16737
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Accurate coarse-graining of small organic molecules in melts and thin films using density-dependent potentials
Dutta, Sayan
Lesniewski, Maria C.
Qaisrani, Muhammad Nawaz
Noid, W. G.
Andrienko, Denis
Nikoubashman, Arash
Soft Condensed Matter
Conjugated organic molecules play a central role in a wide range of optoelectronic devices, including organic light-emitting diodes, organic field-effect transistors, and organic solar cells. A major bottleneck in the computational design of these materials is the discrepancy between simulation and experimental time and length scales. Coarse-graining (CG) offers a promising solution to bridge this gap by reducing redundant degrees of freedom and smoothing the potential energy landscape, thereby significantly accelerating molecular dynamics simulations. However, standard CG models are typically parameterized from homogeneous bulk simulations and assume density-independent effective interactions. As a consequence, they often fail to replicate inhomogeneous systems, such as (free-standing) thin films, due to an incorrect representation of liquid-vacuum interfacial properties. In this work, we develop a CG parametrization strategy that incorporates local-density-dependent potentials to capture material heterogeneities. We evaluate the methodology by simulating free-standing films and comparing interfacial orientational order parameters between all-atom and CG simulations. The resulting CG models accurately reproduce bulk densities and radial distribution functions as well as molecular orientations at the liquid-vacuum interface. This work paves the way for reliable, computation-driven predictions of atomically resolved interfacial ordering in organic molecular systems.
title Accurate coarse-graining of small organic molecules in melts and thin films using density-dependent potentials
topic Soft Condensed Matter
url https://arxiv.org/abs/2512.16737